Parental gene:

AMMECR1L, ENSPTRG00000012437

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:128570716..128594091(-)


>ENSPTRG00000012437
ATGGGAAAAAGACGTTGTGTTCCTCCACTCGAGCCCAAGTTGGCAGCAGGCTGTTGTGGGGTCAAGAAGCCCAAATTATC
TGGAAGTGGAACGCACAGTCACGGGAATCAGTCCACAACTGTCCCCGGCTCTAGTTCAGGACCTCTTCAAAACCACCAGC
ATGTGGACAGCAGCAGTGGACGGGAGAATGTGTCAGACTTAACTCTGGGACCTGGAAACTCTCCCATCACACGAATGAAT
CCCGCATCGGGAGCGCTGAGCCCTCTTCCCCGGCCTAATGGAACTGCCAACACCACTAAGAATCTGGTGGTGACTGCAGA
GATGTGCTGCTACTGCTTCGACGTACTCTACTGTCACCTCTATGGCTTCCCACAGCCACGACTTCCTAGATTCACCAATG
ACCCCTATCCGCTCTTTGTGACGTGGAAGACAGGGCGGGACAAGCGGCTTCGTGGCTGCATTGGGACCTTCTCAGCCATG
AATCTTCATTCAGGACTCAGGGAATACACGTTAACCAGTGCACTTAAGGACAGCCGATTTCCCCCCCTGACCCGAGAGGA
GCTGCCTAAACTTTTCTGCTCTGTCTCCCTCCTTACTAACTTTGAGGATGCCAGTGATTACCTGGACTGGGAGGTAGGGG
TCCATGGGATTCGAATTGAATTCATTAATGAAAAAGGTGTCAAACGCACAGCCACATATTTACCTGAGGTTGCTAAGGAA
CAAGACTGGGATCAGATCCAGACAATAGACTCCTTGCTCAGGAAAGGTGGCTTTAAAGCTCCAATTACCAGTGAATTCAG
AAAAACGATCAAACTCACCAGGTACCGAAGTGAGAAGGTGACAATCAGTTACGCAGAGTATATTGCTTCCCGACAGCACT
GTTTCCAGAACGGCACTCTTCATGCCCCGCCCCTCTACAATCATTACTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .62 RPM
SRP007412_cerebellum 30 .65 RPM
SRP007412_heart 13 .26 RPM
SRP007412_kidney 28 .71 RPM
SRP007412_liver 22 .68 RPM
SRP007412_testis 53 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009373 ortholog_one2one 1 retrogene
retro_chof_1566,
Callithrix jacchus ENSCJAG00000010743 ortholog_one2one 1 retrogene
retro_cjac_383,
Equus caballus ENSECAG00000023095 ortholog_one2one 1 retrogene
retro_ecab_1085,
Echinops telfairi ENSETEG00000000510 ortholog_one2many 1 retrogene
retro_etel_9,
Homo sapiens ENSG00000144233 ortholog_one2one 1 retrogene
retro_hsap_1227,
Gorilla gorilla ENSGGOG00000014448 ortholog_one2one 1 retrogene
retro_ggor_961,
Myotis lucifugus ENSMLUG00000006871 ortholog_one2one 1 retrogene
retro_mluc_684,
Macaca mulatta ENSMMUG00000001987 ortholog_one2one 1 retrogene
retro_mmul_1302,
Mus musculus ENSMUSG00000041915 ortholog_one2one 2 retrogenes
retro_mmus_1330, retro_mmus_352,
Nomascus leucogenys ENSNLEG00000015793 ortholog_one2one 1 retrogene
retro_nleu_700,
Sarcophilus harrisii ENSSHAG00000014762 ortholog_one2many 1 retrogene
retro_shar_86,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_843 72.61 73.87
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Download FASTA sequences of all ENSPTRG00000012437 retrocopies