Parental gene:

AZI2, ENSPTRG00000014707

Aliases:None
Description:5-azacytidine induced 2 [Source:HGNC Symbol;Acc:24002]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:28759820..28789136(-)


>ENSPTRG00000014707
ATGGATGCACTGGTAGAAGATGATATCTGTATTCTGAATCATGAAAAAGCCCATAAGAGAGATACAGTGACTCCAGTTTC
AATATATTCAGGAGATGAATCTGTTGCTTCCCATTTTGCTCTTGTCACTGCATATGAAGACATCAAAAAACGACTTAAGG
ATTCAGAGAAAGAGAACTCTTTGTTAAAGAAGAGAATAAGATTTTTGGAAGAAAAGCTAATAGCTCGATTTGAGGAAGAA
ACAAGTTCCGTGGGACGAGAACAAGTAAATAAGGCCTATCATGCATATCGAGAGGTTTGCATTGATAGAGATAATTTGAA
GAGCAAACTGGACAAAATGAATAAAGACAACTCTGAATCTTTGAAAGTATTGAATGAGCAGCTACAATCTAAAGAAGTAG
AACTCCTCCAGCTGAGGACAGAGGTGGAAACTCAGCAGGTGATGAGGAATTTAAATCCACCTTCATCAAACTGGGAGGTG
GAAAAGTTGAGCTGTGACCTGAAGATCCATGGTTTGGAACAAGAGCTGGAACTGATGAGGAAAGAATGTAGCGATCTCAA
AATAGAACTACAGAAAGCCAAACAAACGGATCCATATCAGGAAGACAATCTGAAGAGCAGAGATCTCCAAAAACTAAGCA
TTTCAAGTGATAATATGCAGCATGCATACTGGGAACTGAAGAGAGAAATGTCTAATTTACATCTGGTGACTCAAGTACAA
GCTGAACTACTAAGGAAACTGAAAACCTCAACTGCAATCAAGAAAGCCTGTGCCCCTGTAGGATGCAGTGAAGACCTTGG
AAGAGACAGCACAAAACTGCACTTGATGAATTTTACTGCAACATACACAAGACATCCCCCTCTCTTACCAAATGGCAAAG
CTCTTTGTCATACCACATCTTCCCCTTTACCAGGAGATGTAAAGGTTTTATCAGAGAAAGCAATCCTCCAATCATGGACA
GACAATGAGAGATCCATTCCTAATGATGGTACATGCTTTCAGGAACACAGTTCTTATGGCAGAAATTCTCTGGAAGACAA
TTCCTGGGTATTTCCAAGTCCTCCTAAATCAAGTGAGACAGCATTTGGGGAAACTAAAACTAAAACTTTGCCTTTACCCA
ACCTTCCACCACTGCATTACTTGGATCAACATAATCAGAACTGCCTTTATAAGAATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .18 RPM
SRP007412_cerebellum 23 .95 RPM
SRP007412_heart 14 .17 RPM
SRP007412_kidney 26 .39 RPM
SRP007412_liver 11 .10 RPM
SRP007412_testis 30 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010432 ortholog_one2one 2 retrogenes
retro_chof_1794, retro_chof_234,
Dasypus novemcinctus ENSDNOG00000011053 ortholog_one2one 2 retrogenes
retro_dnov_1377, retro_dnov_542,
Homo sapiens ENSG00000163512 ortholog_one2one 2 retrogenes
retro_hsap_1491, retro_hsap_1564,
Gorilla gorilla ENSGGOG00000022881 ortholog_one2one 2 retrogenes
retro_ggor_1145, retro_ggor_1189,
Loxodonta africana ENSLAFG00000008538 ortholog_one2one 2 retrogenes
retro_lafr_529, retro_lafr_925,
Myotis lucifugus ENSMLUG00000000043 ortholog_one2many 3 retrogenes
retro_mluc_1707, retro_mluc_435, retro_mluc_611,
Macaca mulatta ENSMMUG00000000056 ortholog_one2one 1 retrogene
retro_mmul_2135,
Monodelphis domestica ENSMODG00000015075 ortholog_one2one 1 retrogene
retro_mdom_1786,
Nomascus leucogenys ENSNLEG00000004069 ortholog_one2one 1 retrogene
retro_nleu_1714,
Oryctolagus cuniculus ENSOCUG00000014956 ortholog_one2many 1 retrogene
retro_ocun_1778,
Otolemur garnettii ENSOGAG00000005896 ortholog_one2many 1 retrogene
retro_ogar_3078,
Pongo abelii ENSPPYG00000014053 ortholog_one2one 2 retrogenes
retro_pabe_1241, retro_pabe_3784,
Tursiops truncatus ENSTTRG00000016434 ortholog_one2one 1 retrogene
retro_ttru_1093,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1052 74.32 73.72
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Download FASTA sequences of all ENSPTRG00000014707 retrocopies