Parental gene: | FXR1, ENSPTRG00000015656 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 3:184884741..184955703(+) |
>ENSPTRG00000015656
ATGGCGGAGCTGACGGTGGAGGTTCGCGGCTCTAACGGGGCTTTCTACAAGGGATTTATCAAAGATGTTCATGAAGACTC
CCTTACAGTTGTTTTTGAAAATAATTGGCAACCAGAACGCCAGGTTCCATTTAATGAAGTTAGATTACCACCACCACCTG
ATATAAAAAAAGAAATTAGTGAAGGAGATGAAGTAGAGGTATATTCAAGAGCAAATGACCAAGAGCCATGTGGGTGGTGG
TTGGCTAAAGTTCGGATGATGAAAGGAGAATTTTATGTCATTGAATATGCTGCTTGTGACGCTACTTACAATGAAATAGT
CACATTTGAACGACTTCGGCCTGTCAATCAAAATAAAACTGTCAAAAAAAATACCTTCTTTAAATGCACAGTGGATGTTC
CTGAGGATTTGAGAGAGGCGTGTGCTAATGAAAATGCACATAAAGATTTTAAGAAAGCAGTAGGAGCATGCAGAATTTTT
TACCATCCGGAAACAACACAGCTAATGATACTGTCTGCCAGTGAAGCAACTGTGAAGAGAGTAAACATCTTAAGTGACAT
GCATTTGCGAAGTATTCGTACGAAGTTGATGCTTATGTCCAGAAATGAAGAGGCCACTAAGCATTTAGAATGCACAAAAC
AACTTGCAGCAGCTTTTCATGAGGAATTTGTTGTGAGAGAAGATTTAATGGGCCTGGCAATAGGAACACATGGTAGTAAC
ATCCAGCAAGCTAGGAAGGTTCCTGGAGTTACTGCCATTGAGCTAGATGAAGATACTGGAACATTCAGAATCTACGGAGA
GAGTGCTGATGCTGTAAAAAAGGCTAGAGGTTTCTTGGAATTTGTGGAGGATTTTATTCAGGTTCCTAGGAATCTCGTTG
GAAAAGTAATTGGAAAAAATGGCAAAGTTATTCAAGAAATAGTGGACAAATCTGGTGTGGTTCGAGTGAGAATTGAAGGG
GACAATGAAAATAAATTACCCAGAGAAGACGGTATGGTTCCATTTGTATTTGTTGGCACTAAAGAAAGCATTGGAAATGT
GCAGGTTCTTCTAGAGTATCATATTGCCTATCTAAAGGAAGTAGAACAGCTAAGAATGGAACGCCTACAGATTGATGAAC
AGCTGCGACAGATTGGTTCTAGGTCTTATAGCGGAAGAGGCAGAGGTCGTCGGGGACCTAATTACACCTCCGGTTATGGT
ACAAATTCTGAGCTGTCTAACCCCTCTGAAACGGAATCTGAGCGTAAAGACGAGCTGAGTGATTGGTCATTGGCAGGAGA
AGATGATCGAGACAGCCGACATCAGCGTGACAGCAGGAGACGCCCAGGAGGAAGAGGCAGAAGTGTTTCAGGGGGTCGAG
GTCGTGGTGGACCACGTGGTGGCAAATCCTCCATCAGTTCTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTACTT
GATAATACAGAATCAGATCAGACTGCAGACACTGATGCCAGCGAATCTCATCACAGTACTAACCGTCGTAGGCGGTCTCG
TAGACGAAGGACTGATGAAGATGCTGTTCTGATGGATGGAATGACTGAATCTGATACAGCTTCAGTTAATGAAAATGGGC
TAGTCACAGTTGCAGATTATATTTCTAGAGCTGAGTCTCAGAGCAGACAAAGAAACCTCCCAAGGGAAACTTTGGCTAAA
AACAAGAAAGAAATGGCAAAAGATGTGATTGAAGAGCATGGTCCTTCAGAAAAGGCAATAAACGGCCCAACTAGTGCTTC
TGGCGATGACATTTCTAAGCTACAGCGTACTCCAGGAGAAGAAAAGATTAATACCTTAAAAGAAGAAAACACTCAAGAAG
CAGCAGTCCTGAATGGTGTTTCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 57 .59 RPM |
| SRP007412_cerebellum | 71 .45 RPM |
| SRP007412_heart | 171 .61 RPM |
| SRP007412_kidney | 92 .55 RPM |
| SRP007412_liver | 63 .70 RPM |
| SRP007412_testis | 823 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000012105 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005928 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009223 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_691 | 83.29 | 66.83 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSPTRG00000015656 retrocopies