Parental gene:

NIPAL1, ENSPTRG00000016038

Aliases:NIPAL1, NPAL1
Description:NIPA-like domain containing 1 [Source:HGNC Symbol;Acc:27194]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:83993355..84016762(-)


>ENSPTRG00000016038
ATGGGGGCACAGGTGAGGCTGCCGCCCGGAGAGCCCTGCCGAGAAGGATATGTGCTGTCTCTGGTCTGTCCAAACTCCTC
CCAGGCTTGGTGTGAGATCACAAATGTGTCACAGCTGCTGGCTTCTCCTGTGCTCTACACGGACCTGAATTACAGCATAA
ACAACTTGAGCATTTCAGCAAATGTAGAAAACAAATACAGTCTTTATGTGGGCTTGGTACTGGCAGTAAGCTCAAGTATT
TTTATTGGCTCCAGCTTCATACTGAAAAAGAAGGGCCTCTTGCAACTGGCCAGCAAGGGCTTTACTAGAGCTGGACAAGG
TGGACATTCTTACCTGAAGGAATGGCTCTGGTGGGTAGGATTGCTGTCAATGGGAGCAGGAGAGGCTGCAAATTTTGCTG
CTTATGCTTTTGCACCTGCCACCTTGGTCACCCCTCTGGGTGCTTTGAGTGTTCTCATAAGTGCAATATTATCTTCCTAC
TTTTTAAACGAGCACTTGAACATTCATGGGAAAATAGGCTGCATATTAAGTATATTGGGGTCAACTGTGATGGTTATCCA
TGCCCCACAAGAAGAGGAAGTCACATCTTTGCATGAAATGGAAATGAAATTGAGAGACCCAGGGTTTATTTCCTTTGCTG
TGATCATAACTGTGATCTCCTTGGTGCTGATTTTGATTGTGGCTCCCAAGAAAGGACAGACCAATATATTGGTTTATATT
TCAATCTGTTCCTTGATTGGAGCGTTTTCAGTTTCTTCTGTGAAAGGCCTGGGAATTGCCATTAAGGAGCTGATAGAATG
GAAGCCAGTTTACAAACATCCGCTGGTCTTTGTTTTGCTGGCTGTACTTGTGCTTTCAGTAACTACACAGATTAACTATC
TCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTATTATGTATTCTTCACATCCATGGTAGTGACT
TGCTCTGCCATCTTATTCCAAGAGTGGTATGGCATGACAGCTGGAGATATCATTGGGACCCTGAGTGGATTCTTCACTAT
TATCATTGGCATCTTCCTTCTACATGCTTTTAAAAATACTGACATTACTTGGAGTGAGCTTACATCCACTGCTAAGAAAG
AAGCCGTCTCTCTGAATGTCAATGAAAACAATTATGTTTTACTAGAGAACTTGGAGTGTTCAGCCCCGGGATACAATGAT
GATGTTACCTTGTTTAGTAGAACTGATGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .54 RPM
SRP007412_cerebellum 0 .50 RPM
SRP007412_heart 0 .29 RPM
SRP007412_kidney 5 .26 RPM
SRP007412_liver 5 .37 RPM
SRP007412_testis 0 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000002047 ortholog_one2one 1 retrogene
retro_dnov_2048,
Homo sapiens ENSG00000163293 ortholog_one2one 1 retrogene
retro_hsap_2463,
Gorilla gorilla ENSGGOG00000009006 ortholog_one2one 1 retrogene
retro_ggor_1533,
Macaca mulatta ENSMMUG00000018625 ortholog_one2one 1 retrogene
retro_mmul_638,
Nomascus leucogenys ENSNLEG00000017377 ortholog_one2one 1 retrogene
retro_nleu_2814,
Pongo abelii ENSPPYG00000014714 ortholog_one2one 1 retrogene
retro_pabe_1810,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1422 77.39 75.37
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Download FASTA sequences of all ENSPTRG00000016038 retrocopies