Parental gene: | CENPC1, ENSPTRG00000016096 |
| Aliases: | None |
| Description: | Centromere protein C 1 [Source:UniProtKB/TrEMBL;Acc:K7C596] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 4:62369050..62444295(+) |
>ENSPTRG00000016096
ATGGCTGCGTCCGGTCTGGATCATCTCAAAAATGGCTACAGAAGAAGATTTTGTCGACCTTCCAGGGCACGTGACATTAA
CACAGAGCAAGGCCAGAATGTTCTGGAAATCTTACAAGACTGTTTTGAAGAAAAAAGTCTTGCCAATGATTTTAGTACAA
ATTCTACAAAATCAGTGCCTAATTCAACACGCAAAATAAAAGACACTTGTATTCAGTCACCAAGCAAAGAGTGCCAGAAA
TCACATCCAAAGTCAGTTCCAGTTTCTTCAAAGAAGAAAGAAGCCTCTCTACAGTTTGTTGTAGAACCAAGTGAAGCCAC
AAACAGATCAGTTCAGGCCCATGAAGTTCATCAGAAAATTCTGGCAACTGATGTTAGTTCCAAAAATACACCTGACTCGA
AAAAAATGTCAAGTAGAAACATAAATGATCATCACAGCGAAGCTGATGAAGAATTTTACTTATCCGTTGGCTCACCTTTT
GTTCTTTTGGATGCAAAAACATCTGTATCACAAAATGTTATTCCATCTAGTGCCCAAAAGAGAGAGACTTACACTTTTGA
AAATTCAGTAAATATGCTGCCTTCAAGTACAGAGGTTTCAGTTAAAACCAAAAAAAGGTTAAACTTTGATGATAAAGTTA
TGTTAAAGAAAATAGAAATAGATAATAAAGTATCAGATGAAGAGGATAAAACATCAGAAGGACAAGAAAGAAAACCATCA
GGATCATCTCAGAATAGAATACGAGATTCAGAATATGAAATTCAACGACAAGCTAAAAAAAGTTTTTCAACATTGTTTTT
AGAAACAGTAAAACGAAAAAGTGAATCCAGTCCCATTGTTAGGCATGCGGCAACTGCTCCACCTCATTCGTGTCCTCCCG
ATGATACGAAGTTGATAGAGGATGAATTTATAATTGATGAGTTGGATCAAAGTTTTGCCAGTAGATCTTGGATTACAATA
CCAAGAAAGGCAGGGTCTCTGAAACAACGCACAATATCCCCGGCTGAGAGCACTGCACTCCTTCAAGGTAGAAAGTCAAG
AGAAAAGCATCATAATATATTACCTAAGACTTTGGCAAATGACAAACATTCCCATAAACCTCACCCAGTAGAGACATCTC
AGCCCTCTGATAAAACAGTACTGGATACAAGTTATGCTTTGATAGGTGAAACAGTAAATAATTATAGATCTACAAAATAT
GAAATGTATTCCAAGAATGCAGAAAAACCATCTAGAAGCAAAAGGACTATAAAACAAAAACAGAGAAGAAAATTCATGGC
TAAACCAGCTGAAGAACAGCTTGATGTGGGACAGTCTAAAGATGAAAACATACATACATCACGTATTACCCAAGACGAAT
TTCAAAGAAATTCAGACAGAAATATGGAAGAGCGTGAAGAGATGGGAAATGATTGTGTTTCCAAAAAACAGATGCCACCT
GTGGGAAGCAAGAAAAGTAGCACTAGAAAAGATAAGGAAGAATCTAAAAAGAAGCGCTTTTCCAGTGAGTCCAAGAACAA
ACTTGTACCTGAAGAAGTGACTTCAACTGTCACAAAAAGTCGAAGAATTTCCAGGCGTCCATCTGATTGGTGGGTGGTAA
AATCAGAGGAGAGTCCTGTTTATAGCAATTCTTCAGTAAGAAATGAATTACCAATGCATCACAATAGTAGCCAAAAATCT
ACTAAGAAAACAAATCAGTCATCTAAGAATATTAGGAAAAAAACTATTCCACTTAAAAGGCAGAAGACAGCAACTAAAGG
CAACCAAAGAGTACAGAAGTTTTTAAATGCTGAAGGTTCTGGAGGTATCGTTGGTCATGATGAAATTTCCAGATGTTCGC
TGAGTGAGCCATTGGAAAGTGATGAGGCAGACTTGGCTAAGAAGAAAAATCTTGATTGTTCTAGATCTACAAGAAGCTCA
AAGAATGAAGATAATATTATGACTGCACAGAATGTTCCCCTAAAGCCTCAGACCAGTGGATATACATGTAATATACCAAC
AGAGTCAAACTTGGATTCTGGAGAGCATAAGACTTCAGTTTTAGAGGAAAGTGGACCTTCCAGGCTCAATAATAATTATT
TAATATCTGGAAAGAATGATGTGGATGATGAGGAAGTTCATGGAAGTTCAGATGACTCAAAACAATCTAAAGTGATACCA
AAGAACAGAATCCATCACAAACTAGTATTGCCCTCCAACACACCAAATGTTCGCAGGACCAAGAGAACACGTTTGAAACC
TTTGGAGTACTGGCGAGGAGAGCGAATAGATTATCAAGGAAGGCCATCAGGAGGATTCGTGATTAGTGGAGTACTATCTC
CAGACACAATATCGTCTAAAAGGAAGGCAAAAGAAAATACTGGAAAAGTCAACAAAAAATCTAATAAGAAAAGGATCTGT
CTTGATAACGATGAAAGAAAGACTAACTTAATGGTAAATCTAGGTATACCTCTTGGAGATCCTTTGCAGCCAACGAGGGT
AAAGGACCCAGAAACAAGAGAGATTATTCTCATGGATCTTGTAAGGCCACAAGATACATATCAATTTTTTGTTAAGCATG
GTGAGTTGAAGGTATACAAGACATTGGATACACCCTTTTTTTCTACTGGGAAATTGATATTAGGACCACAAGAAGAAAAG
GGAAAGCAGCATGTTGGCCAGGATATATTGGTTTTTTATGTTAACTTTGGTGACCTTTTGTGTACTTTACATGAAACACC
TTATATATTAAGTACTGGGGATTCGTTCTATGTTCCTTCAGGTAACTATTATAACATCAAAAATCTCCGGAATGAGGAAA
GTGTTCTTCTTTTTACTCAGATAAAAAGATGA
ATGGCTGCGTCCGGTCTGGATCATCTCAAAAATGGCTACAGAAGAAGATTTTGTCGACCTTCCAGGGCACGTGACATTAA
CACAGAGCAAGGCCAGAATGTTCTGGAAATCTTACAAGACTGTTTTGAAGAAAAAAGTCTTGCCAATGATTTTAGTACAA
ATTCTACAAAATCAGTGCCTAATTCAACACGCAAAATAAAAGACACTTGTATTCAGTCACCAAGCAAAGAGTGCCAGAAA
TCACATCCAAAGTCAGTTCCAGTTTCTTCAAAGAAGAAAGAAGCCTCTCTACAGTTTGTTGTAGAACCAAGTGAAGCCAC
AAACAGATCAGTTCAGGCCCATGAAGTTCATCAGAAAATTCTGGCAACTGATGTTAGTTCCAAAAATACACCTGACTCGA
AAAAAATGTCAAGTAGAAACATAAATGATCATCACAGCGAAGCTGATGAAGAATTTTACTTATCCGTTGGCTCACCTTTT
GTTCTTTTGGATGCAAAAACATCTGTATCACAAAATGTTATTCCATCTAGTGCCCAAAAGAGAGAGACTTACACTTTTGA
AAATTCAGTAAATATGCTGCCTTCAAGTACAGAGGTTTCAGTTAAAACCAAAAAAAGGTTAAACTTTGATGATAAAGTTA
TGTTAAAGAAAATAGAAATAGATAATAAAGTATCAGATGAAGAGGATAAAACATCAGAAGGACAAGAAAGAAAACCATCA
GGATCATCTCAGAATAGAATACGAGATTCAGAATATGAAATTCAACGACAAGCTAAAAAAAGTTTTTCAACATTGTTTTT
AGAAACAGTAAAACGAAAAAGTGAATCCAGTCCCATTGTTAGGCATGCGGCAACTGCTCCACCTCATTCGTGTCCTCCCG
ATGATACGAAGTTGATAGAGGATGAATTTATAATTGATGAGTTGGATCAAAGTTTTGCCAGTAGATCTTGGATTACAATA
CCAAGAAAGGCAGGGTCTCTGAAACAACGCACAATATCCCCGGCTGAGAGCACTGCACTCCTTCAAGGTAGAAAGTCAAG
AGAAAAGCATCATAATATATTACCTAAGACTTTGGCAAATGACAAACATTCCCATAAACCTCACCCAGTAGAGACATCTC
AGCCCTCTGATAAAACAGTACTGGATACAAGTTATGCTTTGATAGGTGAAACAGTAAATAATTATAGATCTACAAAATAT
GAAATGTATTCCAAGAATGCAGAAAAACCATCTAGAAGCAAAAGGACTATAAAACAAAAACAGAGAAGAAAATTCATGGC
TAAACCAGCTGAAGAACAGCTTGATGTGGGACAGTCTAAAGATGAAAACATACATACATCACGTATTACCCAAGACGAAT
TTCAAAGAAATTCAGACAGAAATATGGAAGAGCGTGAAGAGATGGGAAATGATTGTGTTTCCAAAAAACAGATGCCACCT
GTGGGAAGCAAGAAAAGTAGCACTAGAAAAGATAAGGAAGAATCTAAAAAGAAGCGCTTTTCCAGTGAGTCCAAGAACAA
ACTTGTACCTGAAGAAGTGACTTCAACTGTCACAAAAAGTCGAAGAATTTCCAGGCGTCCATCTGATTGGTGGGTGGTAA
AATCAGAGGAGAGTCCTGTTTATAGCAATTCTTCAGTAAGAAATGAATTACCAATGCATCACAATAGTAGCCAAAAATCT
ACTAAGAAAACAAATCAGTCATCTAAGAATATTAGGAAAAAAACTATTCCACTTAAAAGGCAGAAGACAGCAACTAAAGG
CAACCAAAGAGTACAGAAGTTTTTAAATGCTGAAGGTTCTGGAGGTATCGTTGGTCATGATGAAATTTCCAGATGTTCGC
TGAGTGAGCCATTGGAAAGTGATGAGGCAGACTTGGCTAAGAAGAAAAATCTTGATTGTTCTAGATCTACAAGAAGCTCA
AAGAATGAAGATAATATTATGACTGCACAGAATGTTCCCCTAAAGCCTCAGACCAGTGGATATACATGTAATATACCAAC
AGAGTCAAACTTGGATTCTGGAGAGCATAAGACTTCAGTTTTAGAGGAAAGTGGACCTTCCAGGCTCAATAATAATTATT
TAATATCTGGAAAGAATGATGTGGATGATGAGGAAGTTCATGGAAGTTCAGATGACTCAAAACAATCTAAAGTGATACCA
AAGAACAGAATCCATCACAAACTAGTATTGCCCTCCAACACACCAAATGTTCGCAGGACCAAGAGAACACGTTTGAAACC
TTTGGAGTACTGGCGAGGAGAGCGAATAGATTATCAAGGAAGGCCATCAGGAGGATTCGTGATTAGTGGAGTACTATCTC
CAGACACAATATCGTCTAAAAGGAAGGCAAAAGAAAATACTGGAAAAGTCAACAAAAAATCTAATAAGAAAAGGATCTGT
CTTGATAACGATGAAAGAAAGACTAACTTAATGGTAAATCTAGGTATACCTCTTGGAGATCCTTTGCAGCCAACGAGGGT
AAAGGACCCAGAAACAAGAGAGATTATTCTCATGGATCTTGTAAGGCCACAAGATACATATCAATTTTTTGTTAAGCATG
GTGAGTTGAAGGTATACAAGACATTGGATACACCCTTTTTTTCTACTGGGAAATTGATATTAGGACCACAAGAAGAAAAG
GGAAAGCAGCATGTTGGCCAGGATATATTGGTTTTTTATGTTAACTTTGGTGACCTTTTGTGTACTTTACATGAAACACC
TTATATATTAAGTACTGGGGATTCGTTCTATGTTCCTTCAGGTAACTATTATAACATCAAAAATCTCCGGAATGAGGAAA
GTGTTCTTCTTTTTACTCAGATAAAAAGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 3 .29 RPM |
| SRP007412_cerebellum | 7 .17 RPM |
| SRP007412_heart | 5 .45 RPM |
| SRP007412_kidney | 7 .77 RPM |
| SRP007412_liver | 4 .12 RPM |
| SRP007412_testis | 23 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000145241 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000029253 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009058 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014736 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_708 | 91.45 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000016096 retrocopies