Parental gene: | BRD9, ENSPTRG00000016688 |
| Aliases: | None |
| Description: | bromodomain containing 9 [Source:HGNC Symbol;Acc:25818] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | GL393538.1:5631..32103(-) |
>ENSPTRG00000016688
ATGAAAGGATACCAAAGTCTTGTATTCAATTTTTTTTTCCTTAAATTGTCAGCCGAAAATGAGAGCACACCTATTCAGCA
ACTCCTGGAACACTTCCTCCGCCAGCTTCAGAGAAAAGGTCTCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTG
CTCCTGGATATTCAATGATAATAAAACATCCCATGGATTTTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAG
TCAGTTACGGAATTTAAGGCAGATTTCAAGCTGATGTGTGATAATGCAATGACATACAATAGGCCAGATACCGTGTACTA
CAAGTTGGCGAGGAAGGTCCTTCACGCAGGCTTTAAGATGATGAGCAAAGAGCGGCTGTTAGCTTTGAAGCGCAGCATGT
CGTTTATGCAGGACATGGATTTTTCTCAGCAGGCAGCTCTTTTGGGCAATGAAGAGACAGCTGTTGAGGAACCTGTCCCT
GAAGTTGTACCAGTACAAGTAGAAACTGCCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGAGCC
TGAAGGGAACGCCTGCAGCTTGACGGACAGTACCACAGAGGAGCACGTGCTGGCGCTGGTGGAGCACGCAGCTGATGAAG
CTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTACCTGAAGAGGAACGGGGACGGGAGCCTGCTCTAC
AGTGTGGTCAACACGGCCGAGCCAGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCTCCAGTAAGCT
ACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAAAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGC
TTTCGATGCAGAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACAGAGATGAG
ACAGGCGTGCAGTGTGCGCTGAGCCTGCAGGAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCT
CCTGGACCAGATCACAGGCGGAGACCACTCTAGGACGCTCTTCCAGCTGAAGCAGAGAAGAAATGTTCCCATGAAGCCTC
CAGATGAAGCCAAGGTTGGGGACACCCTAGGAGACAGCAGCAGCTCTGTTCTGGAGTTCATGTCGATGAAGTCCTATCCC
GACGTCTCTGTGGATATCTCCATGCTCAGCTCTCTGGGGAAGGTGAAGAAGGAGCTGGACCCTGACGACAGCCATTTGAA
CTTGGATGAGACGACGAAGCTCCTGCAGGACCTGCACGAAGCACAGGCGGAGCGCGGTGGATCTCGGCCGTCGTCCAACC
TCAGCTCCCTGTCCAACGCCTCCGAGAGGGACCAGCACCACCTGGGAAGCCCTTCTCGCCTGAGTGTCGGGGAGCAGCCA
GACGTCACCCACGACCCCTATGAGTTTCTTCAGTCTCCAGAGGCTGCGGCCTCTGCCAAGACCTAA
ATGAAAGGATACCAAAGTCTTGTATTCAATTTTTTTTTCCTTAAATTGTCAGCCGAAAATGAGAGCACACCTATTCAGCA
ACTCCTGGAACACTTCCTCCGCCAGCTTCAGAGAAAAGGTCTCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTG
CTCCTGGATATTCAATGATAATAAAACATCCCATGGATTTTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAG
TCAGTTACGGAATTTAAGGCAGATTTCAAGCTGATGTGTGATAATGCAATGACATACAATAGGCCAGATACCGTGTACTA
CAAGTTGGCGAGGAAGGTCCTTCACGCAGGCTTTAAGATGATGAGCAAAGAGCGGCTGTTAGCTTTGAAGCGCAGCATGT
CGTTTATGCAGGACATGGATTTTTCTCAGCAGGCAGCTCTTTTGGGCAATGAAGAGACAGCTGTTGAGGAACCTGTCCCT
GAAGTTGTACCAGTACAAGTAGAAACTGCCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGAGCC
TGAAGGGAACGCCTGCAGCTTGACGGACAGTACCACAGAGGAGCACGTGCTGGCGCTGGTGGAGCACGCAGCTGATGAAG
CTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTACCTGAAGAGGAACGGGGACGGGAGCCTGCTCTAC
AGTGTGGTCAACACGGCCGAGCCAGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCTCCAGTAAGCT
ACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAAAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGC
TTTCGATGCAGAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACAGAGATGAG
ACAGGCGTGCAGTGTGCGCTGAGCCTGCAGGAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCT
CCTGGACCAGATCACAGGCGGAGACCACTCTAGGACGCTCTTCCAGCTGAAGCAGAGAAGAAATGTTCCCATGAAGCCTC
CAGATGAAGCCAAGGTTGGGGACACCCTAGGAGACAGCAGCAGCTCTGTTCTGGAGTTCATGTCGATGAAGTCCTATCCC
GACGTCTCTGTGGATATCTCCATGCTCAGCTCTCTGGGGAAGGTGAAGAAGGAGCTGGACCCTGACGACAGCCATTTGAA
CTTGGATGAGACGACGAAGCTCCTGCAGGACCTGCACGAAGCACAGGCGGAGCGCGGTGGATCTCGGCCGTCGTCCAACC
TCAGCTCCCTGTCCAACGCCTCCGAGAGGGACCAGCACCACCTGGGAAGCCCTTCTCGCCTGAGTGTCGGGGAGCAGCCA
GACGTCACCCACGACCCCTATGAGTTTCTTCAGTCTCCAGAGGCTGCGGCCTCTGCCAAGACCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 14 .48 RPM |
| SRP007412_cerebellum | 18 .57 RPM |
| SRP007412_heart | 3 .15 RPM |
| SRP007412_kidney | 6 .90 RPM |
| SRP007412_liver | 4 .06 RPM |
| SRP007412_testis | 7 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pan troglodytes | ENSPTRG00000008103 | within_species_paralog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2061 | 98.61 | 71.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000016688 retrocopies