Parental gene: | RAD1, ENSPTRG00000016783 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 5:80270513..80277511(+) |
>ENSPTRG00000016783
ATGCCCCTTCTGACCCAACAGATCCAAGACGAGGATGATCAGTACAGCCTTGTGGCCAGCCTTGACAACGTTAGGAATCT
CTCCACTATCTTGAAAGCTATTCATTTCCGAGAACATGCCACGTGTTTCGCAACTAAAAATGGTATCAAAGTAACAGTGG
AAAATGCAAAGTGTGTGCAAGCAAATGCTTTTATTCAGGCTGGAATATTTCAGGAGTTTAAAGTTCAGGAAGAGTCTGTT
ACTTTTCGAATTAATTTAACTGTCCTTTTAGACTGTTTATCTATTTTTGGATCAAGTCCTATGCCAGGGACTTTAACTGC
ACTTCGGATGTGTTACCAAGGTTATGGTTACCCTTTGATGCTGTTCCTGGAAGAAGGAGGAGTGGTGACAGTCTGCAAAA
TCAATACACAGGAACCTGAGGAGACCCTGGACTTTGATTTCTGCAGCACCAATGTTATTAATAAAATTATTCTGCAGTCA
GAGGGGCTCCGTGAAGCATTTTCTGAATTGGATATGACGAGTGAAGTCCTACAAATTACCATGTCTCCTGACAAGCCTTA
TTTCAGGTTATCTACTTTTGGAAATGCAGGAAGTTCCCACCTTGACTATCCCAAAGATTCTGATTTGATGGAAGCATTTC
ATTGTAATCAGACCCAAGTCAACAGATACAAGATTTCCTTACTGAAACCCTCTACAAAGGCATTAGTCCTATCTTGTAAG
GTATCTATTCGGACAGATAACAGAGGCTTCCTTTCATTACAGTATATGATTAGAAATGAAGATGGACAAATATGTTTTGT
GGAATATTACTGCTGCCCTGATGAAGAAGTTCCTGAATCTGAGTCTTGA
ATGCCCCTTCTGACCCAACAGATCCAAGACGAGGATGATCAGTACAGCCTTGTGGCCAGCCTTGACAACGTTAGGAATCT
CTCCACTATCTTGAAAGCTATTCATTTCCGAGAACATGCCACGTGTTTCGCAACTAAAAATGGTATCAAAGTAACAGTGG
AAAATGCAAAGTGTGTGCAAGCAAATGCTTTTATTCAGGCTGGAATATTTCAGGAGTTTAAAGTTCAGGAAGAGTCTGTT
ACTTTTCGAATTAATTTAACTGTCCTTTTAGACTGTTTATCTATTTTTGGATCAAGTCCTATGCCAGGGACTTTAACTGC
ACTTCGGATGTGTTACCAAGGTTATGGTTACCCTTTGATGCTGTTCCTGGAAGAAGGAGGAGTGGTGACAGTCTGCAAAA
TCAATACACAGGAACCTGAGGAGACCCTGGACTTTGATTTCTGCAGCACCAATGTTATTAATAAAATTATTCTGCAGTCA
GAGGGGCTCCGTGAAGCATTTTCTGAATTGGATATGACGAGTGAAGTCCTACAAATTACCATGTCTCCTGACAAGCCTTA
TTTCAGGTTATCTACTTTTGGAAATGCAGGAAGTTCCCACCTTGACTATCCCAAAGATTCTGATTTGATGGAAGCATTTC
ATTGTAATCAGACCCAAGTCAACAGATACAAGATTTCCTTACTGAAACCCTCTACAAAGGCATTAGTCCTATCTTGTAAG
GTATCTATTCGGACAGATAACAGAGGCTTCCTTTCATTACAGTATATGATTAGAAATGAAGATGGACAAATATGTTTTGT
GGAATATTACTGCTGCCCTGATGAAGAAGTTCCTGAATCTGAGTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .22 RPM |
| SRP007412_cerebellum | 6 .38 RPM |
| SRP007412_heart | 7 .61 RPM |
| SRP007412_kidney | 7 .48 RPM |
| SRP007412_liver | 5 .47 RPM |
| SRP007412_testis | 11 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018514 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000113456 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004219 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000030184 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014437 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014822 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000015389 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000002894 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_462 | 87.27 | 77.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000016783 retrocopies