Parental gene: | AGGF1, ENSPTRG00000017008 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 5:38476325..38509036(-) |
>ENSPTRG00000017008
ATGGCCTCGGAGGCGCCGTCCCCGCCGCGGTCGCCGCCGCCGCCCACCTCCCCCGAGCCTGAGCTGGCCCAGCTAAGGCG
GAAGGTGGAGAAGTTGGAACGTGAACTGCGGAGCTGCAAGCGGCAGGTGCGGGAGATCGAGAAGCTGCTGCATCACACAG
AACGGCTGTACCAGAACGCAGAAAGCAACAACCAGGAGCTCCGCACGCAGGTGGAAGAACTCAGTAAAATACTCCAACGT
GGGAGAAATGAAGATAATAAAAAGTCTGATGTAGAAGTACAAACAGAGAACCATGCTCCTTGGTCAATCTCAGATTATTA
TTATCAGACGTACTACAATGACGTTAGTCTTCCAAATAAAGTGACTGAACTGTCAGATCAACAAGATCAAGCTATCGAAA
CTTCTATTTTGAATTCTGAAGACCATTTACAAATAGAAAATGATGCTTACCCTGGTACCGATAGAACAGAAAATGTTAAA
TATAGACAAGTGGACAATTTTGCCTCAAATTCACAGGAGCCAGCATCTGCATTAGCAACAGAAGATACCTCCTTAGAAGG
CTCATCATTAGCTGAAAGTTTGAGAGCTGCAGCAGAAGCAGCTGTATCACAGACTGGATTTAGTTATGATGAAAATACTG
GACTGTATTTTGACCACAGCACTGGTTTCTATTATGATTCTGAAAATCAACTCTATTATGATCCTTCCACTGGAATTTAT
TACTATTGTGATGTGGAAAGTGGTCGTTATCAGTTTCATTCTCGAGTAGATTTGCAACCTTATCAGACTTCTAGCACAAA
ACAAAGTAAAGATAAAAAATTGAAGAAGAAAAGAAAAGATCCAGATTCTTCTGCAACAAATGAGGAAAAGGATTTGAACT
CAGAGGATCAAAAAGCCTTCAGTGTTGAACATACAAGCTGCAATGAGGAAGAAAATTTCGCAAATATGAAAAAGAAGGCC
AAAATAGGCATTCATCACAAAAATAGTCCCCCCAAAGTCACTGTTCCAACTAGTGGAAATACTATAGAGTCTCCTCTTCA
TGAAAACATCTCTAATTCAACATCATTTAAAGATGAGAAAATCATGGAGACTGATAGTGAACCAGAGGAAGGTGAAATTA
CAGATTCTCAGACTGAGGATAGTTTTGACGAAGACATTACCAGTGAAGGCAATGTAACTGCAGAAGATAGTGAGGATGAA
GATGAAGACAAAATTTGGCCCCCATGTATTAGAGTAATTGTCATTAGATCACCTGTGTTGCAGATAGGATCACTCTTTAT
CATTACTGCTGTAAACTCTGCTACAATTGGAAGAGAAAAGGATATGGAACATACTCTCCGAATCCCTGAAGTTGGTGTCA
GTAAGTTTCATGCAGAAATTTATTTTGACCATGACTTACAAAGTTATGTCCTTGTGGATCAAGGCAGTCAAAATGGCACA
ATTGTTAATGGAAAACAGATTCTTCAGCCGAAAACTAAATGTGACCCTTACGTACTTGAGCATGGAGATGAAGTCAAAAT
TGGAGAAACTGTCTTATCCTTTCACATTCATCCTGGCAGTGATACCTGTGATGGCTGTGAACCAGGGCAGGTTAGAGCCC
ACCTTCGCCTTGATAAGAAAGATGAATCTTTTGTTGGTCCAACACTAAGTAAGGAGGAAAAAGAGTTGGAAAGAAGAAAA
GAATTAAAGAAAATACGAGTAAAATATGGTTTACAGAATACAGAATACGAAGATGAAAAGACATTGAAGAATCCAAAATA
TAAAGATAGAGCTGGAAAACGCAGGGAGCAGGTTGGAAGTGAAGGAACTTTCCAAAGAGATGATGCTCCTGCATCTGTTC
ATTCTGAAATTACTGATAGCAACAAAGGTCGGAAGATGTTGGAGAAGATGGGTTGGAAGAAAGGAGAGGGCCTGGGGAAG
GATGGTGGAGGAATGAAAACGCCGATCCAGCTTCAGCTTCGGCGAACACATGCAGGCTTGGGGACAGGCAAACCATCCTC
AATTGAAGATGTTCACCTTCTCCAAAACAAGAACAAAAAAAACTGGGACAAAGCACGAGAGCGGTTTACTGAAAACTTCC
CAGAAACTAAGCCTCAAAAAGATGACCCAGGGACCATGCCTTGGGTAAAAGGGACTTTAGAGTGA
ATGGCCTCGGAGGCGCCGTCCCCGCCGCGGTCGCCGCCGCCGCCCACCTCCCCCGAGCCTGAGCTGGCCCAGCTAAGGCG
GAAGGTGGAGAAGTTGGAACGTGAACTGCGGAGCTGCAAGCGGCAGGTGCGGGAGATCGAGAAGCTGCTGCATCACACAG
AACGGCTGTACCAGAACGCAGAAAGCAACAACCAGGAGCTCCGCACGCAGGTGGAAGAACTCAGTAAAATACTCCAACGT
GGGAGAAATGAAGATAATAAAAAGTCTGATGTAGAAGTACAAACAGAGAACCATGCTCCTTGGTCAATCTCAGATTATTA
TTATCAGACGTACTACAATGACGTTAGTCTTCCAAATAAAGTGACTGAACTGTCAGATCAACAAGATCAAGCTATCGAAA
CTTCTATTTTGAATTCTGAAGACCATTTACAAATAGAAAATGATGCTTACCCTGGTACCGATAGAACAGAAAATGTTAAA
TATAGACAAGTGGACAATTTTGCCTCAAATTCACAGGAGCCAGCATCTGCATTAGCAACAGAAGATACCTCCTTAGAAGG
CTCATCATTAGCTGAAAGTTTGAGAGCTGCAGCAGAAGCAGCTGTATCACAGACTGGATTTAGTTATGATGAAAATACTG
GACTGTATTTTGACCACAGCACTGGTTTCTATTATGATTCTGAAAATCAACTCTATTATGATCCTTCCACTGGAATTTAT
TACTATTGTGATGTGGAAAGTGGTCGTTATCAGTTTCATTCTCGAGTAGATTTGCAACCTTATCAGACTTCTAGCACAAA
ACAAAGTAAAGATAAAAAATTGAAGAAGAAAAGAAAAGATCCAGATTCTTCTGCAACAAATGAGGAAAAGGATTTGAACT
CAGAGGATCAAAAAGCCTTCAGTGTTGAACATACAAGCTGCAATGAGGAAGAAAATTTCGCAAATATGAAAAAGAAGGCC
AAAATAGGCATTCATCACAAAAATAGTCCCCCCAAAGTCACTGTTCCAACTAGTGGAAATACTATAGAGTCTCCTCTTCA
TGAAAACATCTCTAATTCAACATCATTTAAAGATGAGAAAATCATGGAGACTGATAGTGAACCAGAGGAAGGTGAAATTA
CAGATTCTCAGACTGAGGATAGTTTTGACGAAGACATTACCAGTGAAGGCAATGTAACTGCAGAAGATAGTGAGGATGAA
GATGAAGACAAAATTTGGCCCCCATGTATTAGAGTAATTGTCATTAGATCACCTGTGTTGCAGATAGGATCACTCTTTAT
CATTACTGCTGTAAACTCTGCTACAATTGGAAGAGAAAAGGATATGGAACATACTCTCCGAATCCCTGAAGTTGGTGTCA
GTAAGTTTCATGCAGAAATTTATTTTGACCATGACTTACAAAGTTATGTCCTTGTGGATCAAGGCAGTCAAAATGGCACA
ATTGTTAATGGAAAACAGATTCTTCAGCCGAAAACTAAATGTGACCCTTACGTACTTGAGCATGGAGATGAAGTCAAAAT
TGGAGAAACTGTCTTATCCTTTCACATTCATCCTGGCAGTGATACCTGTGATGGCTGTGAACCAGGGCAGGTTAGAGCCC
ACCTTCGCCTTGATAAGAAAGATGAATCTTTTGTTGGTCCAACACTAAGTAAGGAGGAAAAAGAGTTGGAAAGAAGAAAA
GAATTAAAGAAAATACGAGTAAAATATGGTTTACAGAATACAGAATACGAAGATGAAAAGACATTGAAGAATCCAAAATA
TAAAGATAGAGCTGGAAAACGCAGGGAGCAGGTTGGAAGTGAAGGAACTTTCCAAAGAGATGATGCTCCTGCATCTGTTC
ATTCTGAAATTACTGATAGCAACAAAGGTCGGAAGATGTTGGAGAAGATGGGTTGGAAGAAAGGAGAGGGCCTGGGGAAG
GATGGTGGAGGAATGAAAACGCCGATCCAGCTTCAGCTTCGGCGAACACATGCAGGCTTGGGGACAGGCAAACCATCCTC
AATTGAAGATGTTCACCTTCTCCAAAACAAGAACAAAAAAAACTGGGACAAAGCACGAGAGCGGTTTACTGAAAACTTCC
CAGAAACTAAGCCTCAAAAAGATGACCCAGGGACCATGCCTTGGGTAAAAGGGACTTTAGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 21 .74 RPM |
| SRP007412_cerebellum | 27 .57 RPM |
| SRP007412_heart | 18 .25 RPM |
| SRP007412_kidney | 29 .05 RPM |
| SRP007412_liver | 14 .63 RPM |
| SRP007412_testis | 66 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pongo abelii | ENSPPYG00000015574 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_3068 | 74.87 | 54.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000017008 retrocopies