Parental gene: | PINX1, ENSPTRG00000019980 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | GL390916.1:2643712..2720398(-) |
>ENSPTRG00000019980
ATGTCTATGCTGGCTGAACGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGTAATGACGATTC
CAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAG
ATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCAT
CAGGATGATTTTAACCAGCTTCTGGCCGAACTGAACACTTGCCACGGGCAGGAAACCGCAGATTCCTCAGACAAGAAGGA
AAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGGAAGG
ATCTGTCATCTCGGAGCAAAACAGATCTTGACTGCATTTTTGGGAAAAGACAGAGTAAGAAGACTCCCGAGGGCGATGCC
AGTCCCTCCACTTCAGATGAGAACGAAACCACGACAACCAGTGCCTTCACCATCCAGGAGTACTTTGCCAAGCGGATGGC
GGCACTGAAGAACAAGCCCCAGGTTCCAGTTCCAGGGTCTGACATTTCCGAGACGCAGGTGGAACGTAAAAGGGGGAAGA
AAAGAAATAAAGAGTCCACAGGTAAAGATGTGGAAAGTTACCTCCAGCCTAAGGCCAAGAGGCACACGGAGGGAAAGCCC
GAGAGGGCCGAGGCCCAGGAGCGAGTGGCCAAGAAGAAGAGCGTGCCAGCAGAAGAGCAGCTCAGAGGCCCCTGCTGGGA
CCAGAGTTCCAAGGCCTCTGCTCAGGATGCAGGGGACCATGTGCAGCCGCCTGAGGGCCAGGACTTCACCCTGAAGCCCA
AAAAGAGGAGAGGGAAGAAAAAGCTGCAAAAACCAGTAGAGATAGCAGAGGATGCTACACTAGAAGAAACGCTAGTGAAA
AACAAGAAGAAGAAGAAGAAGAAGAAGAAAGATTCCAAATGA
ATGTCTATGCTGGCTGAACGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGTAATGACGATTC
CAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAG
ATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCAT
CAGGATGATTTTAACCAGCTTCTGGCCGAACTGAACACTTGCCACGGGCAGGAAACCGCAGATTCCTCAGACAAGAAGGA
AAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGGAAGG
ATCTGTCATCTCGGAGCAAAACAGATCTTGACTGCATTTTTGGGAAAAGACAGAGTAAGAAGACTCCCGAGGGCGATGCC
AGTCCCTCCACTTCAGATGAGAACGAAACCACGACAACCAGTGCCTTCACCATCCAGGAGTACTTTGCCAAGCGGATGGC
GGCACTGAAGAACAAGCCCCAGGTTCCAGTTCCAGGGTCTGACATTTCCGAGACGCAGGTGGAACGTAAAAGGGGGAAGA
AAAGAAATAAAGAGTCCACAGGTAAAGATGTGGAAAGTTACCTCCAGCCTAAGGCCAAGAGGCACACGGAGGGAAAGCCC
GAGAGGGCCGAGGCCCAGGAGCGAGTGGCCAAGAAGAAGAGCGTGCCAGCAGAAGAGCAGCTCAGAGGCCCCTGCTGGGA
CCAGAGTTCCAAGGCCTCTGCTCAGGATGCAGGGGACCATGTGCAGCCGCCTGAGGGCCAGGACTTCACCCTGAAGCCCA
AAAAGAGGAGAGGGAAGAAAAAGCTGCAAAAACCAGTAGAGATAGCAGAGGATGCTACACTAGAAGAAACGCTAGTGAAA
AACAAGAAGAAGAAGAAGAAGAAGAAGAAAGATTCCAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .22 RPM |
| SRP007412_cerebellum | 3 .41 RPM |
| SRP007412_heart | 1 .52 RPM |
| SRP007412_kidney | 4 .42 RPM |
| SRP007412_liver | 4 .26 RPM |
| SRP007412_testis | 14 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000008087 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000254093 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2469 | 70.96 | 98.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000019980 retrocopies