Parental gene: | MAF1, ENSPTRG00000020681 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 8:142998786..143001988(+) |
>ENSPTRG00000020681
ATGAAGCTATTGGAGAACTCGAGCTTTGAAGCCATCAACTCACAGCTGACTGTGGAGACCGGAGATGCCCACATCATTGG
CAGGATTGAGAGCTACTCATGTAAGATGGCAGGAGACGACAAACACATGTTCAAGCAGTTCTGCCAGGAGGGCCAGCCCC
ACGTGCTGGAGGCACTTTCTCCACCCCAGACTTCAGGACTGAGCCCCAGCAGACTCAGCAAAAGCCAAGGCGGTGAGGAG
GAGGGCCCCCTCAGTGACAAGTGCAGCCGCAAGACCCTCTTCTACCTGATCGCCACGCTCAATGAGTCCTTCAGGCCTGA
CTATGACTTCAGCACAGCCCGCAGCCATGAGTTCAGCCGGGAGCCCAGCCTCAGCTGGGTGGTGAATGCAGTCAACTGCA
GTCTGTTCTCAGCTGTGCGGGAGGACTTCAAGGACCTGAAACCACAGCTGTGGAACGCAGTGGACGAGGAGATCTGCCTG
GCTGAATGTGACATCTACAGCTATAACCCAGACTTGGACTCAGATCCCTTCGGGGAGGATGGTAGCCTCTGGTCCTTCAA
CTACTTCTTCTACAACAAGCGGCTCAAGCGAATCGTCTTCTTTAGCTGCCGTTCCATCAGTGGCTCCACCTACACACCCT
CAGAGGCAGGCAACGAGCTGGACATGGAGCTGGGGGAGGAGGAGGTGGAGGAAGAAAGCAGAAGCGGAGGCAGTGGGGCC
GAGGAGACCAGCACCATGGAGGAGGACAGGGTCCCAGTGATCTGTATTTGA
ATGAAGCTATTGGAGAACTCGAGCTTTGAAGCCATCAACTCACAGCTGACTGTGGAGACCGGAGATGCCCACATCATTGG
CAGGATTGAGAGCTACTCATGTAAGATGGCAGGAGACGACAAACACATGTTCAAGCAGTTCTGCCAGGAGGGCCAGCCCC
ACGTGCTGGAGGCACTTTCTCCACCCCAGACTTCAGGACTGAGCCCCAGCAGACTCAGCAAAAGCCAAGGCGGTGAGGAG
GAGGGCCCCCTCAGTGACAAGTGCAGCCGCAAGACCCTCTTCTACCTGATCGCCACGCTCAATGAGTCCTTCAGGCCTGA
CTATGACTTCAGCACAGCCCGCAGCCATGAGTTCAGCCGGGAGCCCAGCCTCAGCTGGGTGGTGAATGCAGTCAACTGCA
GTCTGTTCTCAGCTGTGCGGGAGGACTTCAAGGACCTGAAACCACAGCTGTGGAACGCAGTGGACGAGGAGATCTGCCTG
GCTGAATGTGACATCTACAGCTATAACCCAGACTTGGACTCAGATCCCTTCGGGGAGGATGGTAGCCTCTGGTCCTTCAA
CTACTTCTTCTACAACAAGCGGCTCAAGCGAATCGTCTTCTTTAGCTGCCGTTCCATCAGTGGCTCCACCTACACACCCT
CAGAGGCAGGCAACGAGCTGGACATGGAGCTGGGGGAGGAGGAGGTGGAGGAAGAAAGCAGAAGCGGAGGCAGTGGGGCC
GAGGAGACCAGCACCATGGAGGAGGACAGGGTCCCAGTGATCTGTATTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 45 .29 RPM |
| SRP007412_cerebellum | 51 .26 RPM |
| SRP007412_heart | 43 .89 RPM |
| SRP007412_kidney | 84 .34 RPM |
| SRP007412_liver | 39 .28 RPM |
| SRP007412_testis | 65 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000021450 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000179632 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007155 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010478 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018963 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1829 | 70.33 | 79.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000020681 retrocopies