Parental gene:

FAR1, ENSPTRG00000024190

Aliases:FAR1, MLSTD2
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:13478129..13544643(+)


>ENSPTRG00000024190
ATGGTTTCAATCCCAGAATACTATGAAGGCAAGAATGTCCTCCTCACAGGAGCTACCGGTTTTCTAGGGAAGGTGCTTCT
GGAAAAGTTGCTGAGGTCTTGTCCTAAGGTGAATTCAGTATATGTTTTGGTGAGGCAGAAAGCTGGACAGACACCACAAG
AGCGAGTGGAAGAAGTCCTTAGTGGCAAGCTTTTTGACAGATTGAGAGATGAAAATCCAGATTTTAGAGAGAAGATTATA
GCAATCAACAGCGAACTCACCCAACCTAAACTGGCTCTCAGTGAAGAAGATAAAGAGGTGATCATAGATTCTACCAATAT
TATATTCCACTGTGCAGCTACAGTAAGGTTTAATGAAAATTTAAGAGATGCTGTTCAGTTAAATGTGATTGCAACGCGAC
AGCTTATTCTCCTTGCACAACAAATGAAGAATCTGGAAGTGTTCATGCATGTATCAACAGCATATGCCTACTGTAATCGA
AAGCATATTGATGAAGTAGTCTATCCACCACCTGTGGATCCCAAGAAGCTGATTGATTCTTTAGAGTGGATGGATGATGG
CCTAGTAAATGATATCACGCCAAAATTGATAGGAGACAGACCTAATACATACATATACACAAAAGCATTGGCAGAATATG
TTGTACAACAAGAAGGAGCAAAACTAAATGTGGCAATTGTAAGGCCATCGATTGTTGGTGCCAGTTGGAAAGAACCTTTT
CCAGGATGGATTGATAACTTTAATGGACCAAGTGGTCTCTTTATTGCGGCAGGGAAAGGAATTCTTCGAACAATACGTGC
CTCCAACAATGCCCTTGCAGATCTTGTTCCTGTAGATGTAGTTGTCAACATGAGTCTTGCGGCAGCCTGGTATTCCGGAG
TTAATAGACCAAGAAACATCATGGTGTATAATTGTACAACAGGCAGCACTAATCCTTTCCACTGGGGTGAAGTTGAGTAC
CATGTAATTTCCACTTTCAAGAGGAATCCTCTCGAACAGGCCTTCAGACGGCCCAATGTAAATCTAACCTCCAATCATCT
TTTATATCATTACTGGATTGCTGTAAGCCATAAGGCCCCAGCATTCCTGTATGATATCTACCTCAGGATGACTGGAAGAA
GCCCAAGGATGATGAAAACAATAACTCGTCTTCACAAAGCTATGGTGTTTCTTGAATATTTCACAAGTAATTCTTGGGTT
TGGAATACTGACAATGTCAATATGTTAATGAATCAACTAAACCCTGAAGATAAAAAGACCTTCAATATTGATGTACGGCA
GTTACATTGGGCAGAATATATAGAGAACTACTGCTTGGGAACTAAGAAGTACGTATTGAATGAAGAAATGTCTGGCCTCC
CTGCAGCCAGAAAACATCTGAACAAGTTGCGGAATATACGTTATGGTTTTAATACTATCCTTGTGATCCTCATCTGGCGC
ATTTTTATTGCAAGATCACAAATGGCAAGAAATATCTGGTACTTTGTGGTTAGTCTGTGTTACAAGTTTCTGTCATACTT
CCGAGCATCCAGCACTATGAGATACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 48 .98 RPM
SRP007412_cerebellum 52 .98 RPM
SRP007412_heart 29 .99 RPM
SRP007412_kidney 28 .71 RPM
SRP007412_liver 3 .57 RPM
SRP007412_testis 35 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003490 ortholog_one2one 2 retrogenes
retro_chof_1358, retro_chof_1733,
Callithrix jacchus ENSCJAG00000010077 ortholog_one2many 1 retrogene
retro_cjac_545,
Cavia porcellus ENSCPOG00000002654 ortholog_one2one 1 retrogene
retro_cpor_267,
Homo sapiens ENSG00000197601 ortholog_one2one 1 retrogene
retro_hsap_1225,
Gorilla gorilla ENSGGOG00000001180 ortholog_one2one 1 retrogene
retro_ggor_958,
Macaca mulatta ENSMMUG00000011990 ortholog_one2one 1 retrogene
retro_mmul_1301,
Nomascus leucogenys ENSNLEG00000017695 ortholog_one2one 1 retrogene
retro_nleu_698,
Oryctolagus cuniculus ENSOCUG00000004336 ortholog_one2one 2 retrogenes
retro_ocun_1056, retro_ocun_790,
Otolemur garnettii ENSOGAG00000005064 ortholog_one2one 2 retrogenes
retro_ogar_1353, retro_ogar_341,
Pongo abelii ENSPPYG00000003470 ortholog_one2one 1 retrogene
retro_pabe_1019,
Rattus norvegicus ENSRNOG00000013176 ortholog_one2one 1 retrogene
retro_rnor_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_840 84.78 53.59
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Download FASTA sequences of all ENSPTRG00000024190 retrocopies