Parental gene:

SLC19A3, ENSPTRG00000028998

Aliases:None
Description:solute carrier family 19, member 3 [Source:HGNC Symbol;Acc:16266]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:232847263..232884619(-)


>ENSPTRG00000028998
ATGGATTGTTACAGAACTTCACTAAGCAGTTCCTGGATTTACCCCACTGTGATCCTCTGCTTATTTGGTTTTTTCTCCAT
GATGAGACCCTCAGAACCATTCCTTATCCCATATTTATCTGGACCAGATAAAAACCTGACGAGTGCAGAGATAACAAATG
AGATCTTCCCCATTTGGACATACTCCTACCTGGCGCTGCTGCTGCCTGTGTTTGTCCTCACCGATTATGTCCGCTACAAG
CCAGTCATCATCTTGCAAGGTATCAGTTTCATCATTACCTGGCTGCTGCTGTTGTTTGGCCAAGGAGTGAAGACCATGCA
GGTTGTAGAGTTCTTCTACGGGATGGTCACCGCCGCCGAGGTGGCCTACTACGCCTACATATACAGCGTGGTCAGCCCCG
AGCACTACCAGAGAGTGAGCGGCTACTGCAGGAGTGTCACGCTGGCCGCCTACACAGCAGGGTCGGTGCTGGCTCAACTC
TTGGTATCCCTGGCGAACATGTCGTACTTTTACCTCAACGTCATATCCTTGGCCTCTGTCTCCGTGGCCTTCCTTTTCTC
ACTTTTCCTACCAATGCCCAAGAAAAGCATGTTTTTTCAGGCAAAACCCAGCAGAGAAATAAAGAAGTCATCAAGCGTGA
ATCCAGTATTAGAGGAAACTCACGAAGGTGAAGCACCAGGCTGTGAAGAGCAGAAACCCACATCAGAAATACTCAGCACT
TCAGGGAAGCTGAATAAGGGCCAGCTGAACAGCCTGAAATCAAGCAATGTGACTGTGGACGTTTTTGTGCAGTGGTTCCA
AGATTTGAAGGAGTGCTACTCCTCAAAACGTCTTTTCTACTGGTCTCTATGGTGGGCTTTCGCCACAGCAGGTTTTAACC
AGGTTTTGAACTATGTTCAAATCCTGTGGGATTACAAGGCGCCATCCCAAGATTCTTCCATCTATAATGGGGCCGTAGAA
GCTATTGCAACCTTTGGAGGGGCTGTGGCTGCCTTTGCAGTGGGTTATGTGAAAGTCAACTGGGACCTTCTGGGAGAGCT
GGCTCTGGCGGTCTTCTCAGTTGTCAATGCCGGTTCTTTATTTCTCATGCATTACACAGCCAATATCTGGGCGTGCTATG
CTGGCTATTTGATATTCAAGTCCAGCTATATGCTTCTTATAACCATAGCAGTATTTCAGATTGCAGTTAATCTGAATGTG
GAACGCTATGCCTTGGTATTTGGAATCAACACCTTTATTGCCTTGGTGATTCAGACCATCATGACTGTGATTGTAGTAGA
TCAGAGAGGGCTCAACTTGCCAGTCAGCATTCAGTTTTTAGTTTATGGGAGCTATTTTGCAGTAATTGCTGGAATTTTCC
TAATGAGAAGCATGTATATTATCTACTCAACCAAATCCCAGAAGGATGTACAGAGCCCTGCTCCAAGTGAGAATCCAGGT
GTGTCTCACCCAGAGGAAGAGAGTAATATCATCATGTCAACAAAACTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .59 RPM
SRP007412_cerebellum 1 .72 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 2 .54 RPM
SRP007412_liver 4 .55 RPM
SRP007412_testis 0 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000135917 ortholog_one2one 1 retrogene
retro_hsap_3732,
Gorilla gorilla ENSGGOG00000004344 ortholog_one2one 1 retrogene
retro_ggor_2518,
Monodelphis domestica ENSMODG00000021220 ortholog_one2many 1 retrogene
retro_mdom_955,
Mustela putorius furo ENSMPUG00000001374 ortholog_one2one 1 retrogene
retro_mputfur_1211,
Nomascus leucogenys ENSNLEG00000013501 ortholog_one2one 1 retrogene
retro_nleu_2561,
Pongo abelii ENSPPYG00000013242 ortholog_one2one 1 retrogene
retro_pabe_3209,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2526 56.15 72.98
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Download FASTA sequences of all ENSPTRG00000028998 retrocopies