Parental gene: | Etv5, ENSRNOG00000001785 |
| Aliases: | None |
| Description: | ETS translocation variant 5 [Source:RefSeq peptide;Acc:NP_001100552] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 11:85282552..85339809(+) |
>ENSRNOG00000001785
ATGGATGGCTTTTGTGATCAGCAAGTCCCTTTTATGGTCCCAGGGAAATCTCGGTCAGAGGACTGTCGAGGGCGACCTGT
GATTGACAGAAAGAGGAAGTTTGTGGACACAGATCTGGCTCACGATTCTGAAGAGTTGTTTCAGGATCTCAGCCAACTTC
AAGAAGCTTGGTTAGCTGAAGCTCAAGTTCCCGACGATGAGCAGTTTGTCCCAGATTTTCAGTCTGATAACTTGGTGCTT
CACGCCCCACCTCCCACCAAGATCAAACGGGAGCTGCACAGCCCCTCCTCTGAGTTGTCCTCCTGTAGCCATGAGCAGGC
TCTTGGTGCTAAGTATGGGGAAAAGTGCCTCTACAACTATTGTGCCTACGACAGGAAGCCTCCCTCTGGGTTCAAGCCAT
TAACCCCGCCCGCCACTCCTTTGTCACCCACCCATCAGAATTCCCTATTTCCCCCACCTCAGGCAACTCTGCCCACCTCA
GCTCTTGCCCCTGGAGCCGGCCCAGTTCAAGGGGTGGGTCCTGCCCCAACCCCTCACTCGCTTCCAGAACCTGGATCACA
GCAGCAAACATTTGCGGTCCCCCGGCCACCACATCAGCCCCTGCAAATGCCAAAGATGATGCCTGAAAGCCAGTATCCAT
CAGAACAGAGATTTCAGCGACAGCTGTCTGAGCCCTGCCGCCCCTTCCCTCCTCAGTCAGGAGTTCCTGGAGATACTCGC
CCCAGCTACCAACGGCAGATGTCAGAGCCCGTTGTCCCCGCAGCCCCACCGCCCCTTCAGGGATTCAAGCAGGAATACCA
CGACCCGCTCTATGAACATGGGGTCCCTGGGATGCCTGGTCCCCCAGCACATGGGTTCCAGTCACCCATGGGAATCAAGC
AGGAGCCCCGAGATTACTGTGCTGACTCAGAAGTGCCTAACTGCCAGTCACCCTACATGAGAGGCCGGTATTTCTCCAGC
AACCATGAAGGATTCACGTATGAAAAGGACCCCAGGCTATACTTCGATGACACTTGCGTGGTGCCGGAAAGGCTGGAAGG
CAAAGTCAAGCAGGAGCCCACCATGTATCGCGAGGGGCCCCCTTACCAGAGGCGAGGCTCTCTGCAGCTGTGGCAGTTTC
TCGTCACCCTTCTGGATGACCCAGCCAATGCCCACTTCATCGCCTGGACTGGCCGAGGCATGGAGTTCAAGCTCATAGAA
CCGGAAGAGGTTGCCCGGCGTTGGGGTATTCAGAAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGTTCCCTCCG
CTATTACTATGAGAAAGGCATCATGCAGAAGGTGGCCGGGGAACGGTACGTCTACAAGTTTGTCTGTGACCCGGATGCAC
TTTTCTCCATGGCCTTCCCCGACAATCAGCGCCCGTTCCTGAAGGCAGAGTCAGATTGCCCCCTCAATGAGGAGGATACC
CTGCCACTGACTCACTTTGAAGACAGCCCTGCTTACCTACTGGACATGGATCGATGCAGCGGCCTCCCCTACGCCGAAGG
CTTCGCTTACTAA
ATGGATGGCTTTTGTGATCAGCAAGTCCCTTTTATGGTCCCAGGGAAATCTCGGTCAGAGGACTGTCGAGGGCGACCTGT
GATTGACAGAAAGAGGAAGTTTGTGGACACAGATCTGGCTCACGATTCTGAAGAGTTGTTTCAGGATCTCAGCCAACTTC
AAGAAGCTTGGTTAGCTGAAGCTCAAGTTCCCGACGATGAGCAGTTTGTCCCAGATTTTCAGTCTGATAACTTGGTGCTT
CACGCCCCACCTCCCACCAAGATCAAACGGGAGCTGCACAGCCCCTCCTCTGAGTTGTCCTCCTGTAGCCATGAGCAGGC
TCTTGGTGCTAAGTATGGGGAAAAGTGCCTCTACAACTATTGTGCCTACGACAGGAAGCCTCCCTCTGGGTTCAAGCCAT
TAACCCCGCCCGCCACTCCTTTGTCACCCACCCATCAGAATTCCCTATTTCCCCCACCTCAGGCAACTCTGCCCACCTCA
GCTCTTGCCCCTGGAGCCGGCCCAGTTCAAGGGGTGGGTCCTGCCCCAACCCCTCACTCGCTTCCAGAACCTGGATCACA
GCAGCAAACATTTGCGGTCCCCCGGCCACCACATCAGCCCCTGCAAATGCCAAAGATGATGCCTGAAAGCCAGTATCCAT
CAGAACAGAGATTTCAGCGACAGCTGTCTGAGCCCTGCCGCCCCTTCCCTCCTCAGTCAGGAGTTCCTGGAGATACTCGC
CCCAGCTACCAACGGCAGATGTCAGAGCCCGTTGTCCCCGCAGCCCCACCGCCCCTTCAGGGATTCAAGCAGGAATACCA
CGACCCGCTCTATGAACATGGGGTCCCTGGGATGCCTGGTCCCCCAGCACATGGGTTCCAGTCACCCATGGGAATCAAGC
AGGAGCCCCGAGATTACTGTGCTGACTCAGAAGTGCCTAACTGCCAGTCACCCTACATGAGAGGCCGGTATTTCTCCAGC
AACCATGAAGGATTCACGTATGAAAAGGACCCCAGGCTATACTTCGATGACACTTGCGTGGTGCCGGAAAGGCTGGAAGG
CAAAGTCAAGCAGGAGCCCACCATGTATCGCGAGGGGCCCCCTTACCAGAGGCGAGGCTCTCTGCAGCTGTGGCAGTTTC
TCGTCACCCTTCTGGATGACCCAGCCAATGCCCACTTCATCGCCTGGACTGGCCGAGGCATGGAGTTCAAGCTCATAGAA
CCGGAAGAGGTTGCCCGGCGTTGGGGTATTCAGAAGAACCGGCCAGCCATGAACTACGACAAGCTGAGCCGTTCCCTCCG
CTATTACTATGAGAAAGGCATCATGCAGAAGGTGGCCGGGGAACGGTACGTCTACAAGTTTGTCTGTGACCCGGATGCAC
TTTTCTCCATGGCCTTCCCCGACAATCAGCGCCCGTTCCTGAAGGCAGAGTCAGATTGCCCCCTCAATGAGGAGGATACC
CTGCCACTGACTCACTTTGAAGACAGCCCTGCTTACCTACTGGACATGGATCGATGCAGCGGCCTCCCCTACGCCGAAGG
CTTCGCTTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .76 RPM |
| SRP017611_kidney | 28 .12 RPM |
| SRP017611_brain | 85 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013420 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000013089 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000009845 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_417 | 82.48 | 64.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1500 | 85.64 | 79.22 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000001785 retrocopies