Parental gene: | Sqstm1, ENSRNOG00000003147 |
| Aliases: | Sqstm1, Osi, ZIP, ZIP3 |
| Description: | Sequestosome-1 [Source:UniProtKB/Swiss-Prot;Acc:O08623] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:35463171..35474738(-) |
>ENSRNOG00000003147
ATGGCTTCGCTCACGGTGAAGGCCTATCTACTGGGCAAGGAGGAGGCGGCCCGCGAGATCCGCCGCTTCAGCTTCTGCTT
CAGCCCGGAGCCGGAGGCGGAAGCCGCGGCTGGCCCGGGGCCCTGCGAGAGGCTGCTGAGCCGGGTGGCTGTGCTGTTCC
CCGCGCTGCGGCCTGGAGGCTTTCAGGCGCACTACCGCGATGAGGATGGGGACTTGGTCGCCTTCTCCAGTGATGAGGAA
CTGACAATGGCCATGTCCTATGTGAAAGATGACATCTTCCGCATCTACATTAAAGAGAAGAAGGAGTGCCGGCGGGAACA
TCGCCCCCCATGTGCTCAGGAGGCACGAAGCATGGTGCACCCCAACGTGATTTGTGATGGTTGCAATGGGCCTGTGGTGG
GAACTCGCTATAAGTGCAGTGTGTGCCCCGACTACGACCTGTGCAGCGTCTGCGAGGGGAAGGGCCTGCACAGGGAGCAC
AGCAAGCTCATCTTTCCCAACCCCTTTGGCCACCTCTCTGATAGCTTCTCTCATAGCCGCTGGCTTCGGAAGCTGAAACA
TGGGCACTTTGGCTGGCCTGGCTGGGAGATGGGCCCACCAGGGAACTGGAGCCCACGTCCTCCTCGCGCAGGGGATGGTC
GCCCTTGCCCCACAGCTGAGTCGGCTTCTGCTCCATCAGAGGATCCCAATGTCAATTTCCTGAAGAATGTGGGGGAGAGC
GTGGCAGCTGCCCTCAGCCCTCTAGGCATCGAGGTTGACATTGATGTGGAACATGGAGGGAAGAGAAGCCGCCTGACACC
CACCTCTGCAGAAAGTTCCAGCACAGGCACAGAAGATAAGAGTGGTACTCAGCCAAGCAGCTGCTCTTCGGAAGTCAGCA
AACCTGACGGGGCCGGGGAGGGCCCTGCTCAGTCTCTGACAGAGCAGATGAAGAAGATAGCCTTGGAGTCGGTGGGACAG
CCAGAGGAACTGATGGAGTCGGATAACTGCTCAGGAGGGGATGACGACTGGACGCATTTGTCTTCTAAAGAAGTGGACCC
ATCCACAGGTGAACTCCAGTCTCTACAGATGCCAGAATCGGAAGGGCCAAGCTCTCTAGACCCCTCACAGGAAGGCCCCA
CAGGGCTGAAGGAAGCTGCCCTGTACCCACATCTCCCACCAGAGGCTGATCCCCGGCTGATTGAGTCACTCTCTCAGATG
CTGTCCATGGGTTTCTCGGATGAAGGCGGCTGGCTCACCAGGCTCCTACAGACCAAGAATTATGACATCGGGGCTGCTCT
GGACACGATCCAGTATTCAAAGCACCCTCCACCATTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 327 .27 RPM |
| SRP017611_kidney | 265 .80 RPM |
| SRP017611_liver | 266 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000003806 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007969 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2916 | 83.74 | 78.88 | Please wait, loading  |
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Download FASTA sequences of all ENSRNOG00000003147 retrocopies