Parental gene: | Nsmce2, ENSRNOG00000003964 |
| Aliases: | Nsmce2, RGD1305156 |
| Description: | E3 SUMO-protein ligase NSE2 [Source:UniProtKB/Swiss-Prot;Acc:Q4V8A0] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 7:100263599..100486902(+) |
>ENSRNOG00000003964
ATGCCAGGACGGTCCAGTACAAATTCAGGTTCTACTCGTTACATATCCTTCAGTGGTGTAGAGTCAGCTCTCTCCTCCTT
AAAAACCTTCCAGTCCTGTATCAGCTCTGGGATGGACACAGTTTCTAGTGTTGCCTTGGACCTTGTGGAGACCCAAACTG
AAGTGAGTAGTGAGTACAGTATGGACAAGGCCATGGTTGAATTTGCTAAAATGGATCGAGAACTAAACCATTATGTTAAG
GCTGTCCAGTCTACAATAAATCATGTAAAAGAAGAACGTCCAGAAAAAGTACCAGATTTAAAATTACTGGTGGAGAAGAA
ATTTTTGGCTTTACAGGATAAGAACTCTGACGCCGACTTTAAAGAGAATGAAAAGTTCGTGCAGTTTAAGCAGCAGCTGC
GGGAGCTGAAGAAGCAATATGGTATTCATGCAGACAGAGAGAATGATGGGATAGAAGGAATGGATGAAGATATGATTGTG
ACCCAGAGCCAAACCAATTTCATCTGCCCCATAACACAGTTGGAAATGAAGAAGCCAGTGAAAAATAAAATGTGTGGCCA
CACATACGAAGAGGAAGCCATTGTTCGCATGATTGAATCCAAGCATAAGAGGAAGAAGAAGGCTTGTTGCCCAAAAATTG
GCTGTAGCCACACAGACATGAGAATGTCAGATCTCATTCCGGATGAAGCCCTGAGAAGGGCAATCGAGAGCCACAACAAG
AAGAAAAAGCGCCACTCCGAGTAG
ATGCCAGGACGGTCCAGTACAAATTCAGGTTCTACTCGTTACATATCCTTCAGTGGTGTAGAGTCAGCTCTCTCCTCCTT
AAAAACCTTCCAGTCCTGTATCAGCTCTGGGATGGACACAGTTTCTAGTGTTGCCTTGGACCTTGTGGAGACCCAAACTG
AAGTGAGTAGTGAGTACAGTATGGACAAGGCCATGGTTGAATTTGCTAAAATGGATCGAGAACTAAACCATTATGTTAAG
GCTGTCCAGTCTACAATAAATCATGTAAAAGAAGAACGTCCAGAAAAAGTACCAGATTTAAAATTACTGGTGGAGAAGAA
ATTTTTGGCTTTACAGGATAAGAACTCTGACGCCGACTTTAAAGAGAATGAAAAGTTCGTGCAGTTTAAGCAGCAGCTGC
GGGAGCTGAAGAAGCAATATGGTATTCATGCAGACAGAGAGAATGATGGGATAGAAGGAATGGATGAAGATATGATTGTG
ACCCAGAGCCAAACCAATTTCATCTGCCCCATAACACAGTTGGAAATGAAGAAGCCAGTGAAAAATAAAATGTGTGGCCA
CACATACGAAGAGGAAGCCATTGTTCGCATGATTGAATCCAAGCATAAGAGGAAGAAGAAGGCTTGTTGCCCAAAAATTG
GCTGTAGCCACACAGACATGAGAATGTCAGATCTCATTCCGGATGAAGCCCTGAGAAGGGCAATCGAGAGCCACAACAAG
AAGAAAAAGCGCCACTCCGAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .73 RPM |
| SRP017611_kidney | 12 .91 RPM |
| SRP017611_brain | 9 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009394 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019897 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003542 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000059586 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015798 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005371 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_701 | 65.41 | 53.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2118 | 78.23 | 59.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000003964 retrocopies