Parental gene: | Cd2ap, ENSRNOG00000011987 |
| Aliases: | Cd2ap, CMS |
| Description: | CD2-associated protein [Source:RefSeq peptide;Acc:NP_852140] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 9:19659499..19720953(+) |
>ENSRNOG00000011987
TTAGTTGACTATATTGTGGAGTATGACTACGATGCTGTACATGATGATGAGTTAACTATCCGAGTTGGGGAAATCATCCG
AAATGTGAAAAAACTACAGGAAGAAGGATGGCTAGAAGGAGAACTAAATGGGAGACGAGGGATGTTCCCTGACAATTTTG
TTAAGGAAATTAAAAGAGAGACAGAACCCAAGGATGACAATTTGCCCATTAAACGGGAAAGGCCTGGAAATGTCGCGAGT
CTGGTCCAGCGAATCAGCACCTACGGACTTCCAGCTGGAGGGATTCAGCCACACCCACAAACCAAAGCTATGAAGAAGAA
GACAAAAAAGCGTCAGTGTAAAGTTCTTTTTGAGTACTCTCCACAAAATGAAGACGAACTGGAACTGACCGTGGGGGATG
TCATTGATGTCATTGAAGAGGTAGAAGAAGGCTGGTGGAGTGGAACCCTGAACAATAAGTTGGGACTGTTTCCCTCAAAC
TTTGTGAAAGAATTAGAGTCCACAGATGATGGTGAAATGCACGACGCTCAGGAGGAATCAGAAGTTTCTTTGACTGGCCC
TACCTCACCTATGCCATCTCCGGGGAATGGGAGTGAACCAGCTCCTGGATCAGTTACACAGCCAAAGAAGATCCGAGGAG
TTGGATTTGGAGACATTTTTAAAGAAGGCTCTGTGAAACTTAGGACAAGAACTTCCAGTAGTGAAACAGAGGAGAAGAAA
TCAGAAAAGCCTTTAATTCTACAGTCACTGGGCTCTAGAACCCAGAATGTGGAGGTAACAAAACCAGACATAGATGGCAA
GATTAAAGCTAAGGAATATTGCAAAACAGTATTTCCCTATACAGGAACCAATGAAGATGAACTTACGTTTAGAGAAGGGG
AGATAATCCATTTGATAAGTAAGGAGACTGGAGAAGCAGGCTGGTGGAAAGGTGAACTGAATGGTAAAGAAGGAGTGTTT
CCAGATAACTTTGCTGTTCAGATAAGTGAACTAGATAAAGACTTTCCAAAACCAAAGAAACCACCTCCTCCTGCAAAAGG
TCCAGCTCCAAAACCTGACCCGTTAGCTGGAGAGAAGAAGACCTTTCCTCTGAAGGCGGAAGACAGAGATGAAAAATCAC
TGCTAGAACAGAAACCTTCTAAACCAGCTGCTCCTCAAGTCCCACCCAAAAAGCCTACTCCACCTACCAAAGCCAATAAT
TTACTGAGGTCTCCTGGAACAATGTACCCAAAGCGGCCGGAAAAGCCAGTTCCTCCTCCACCTCCAACAGCCAAAATTAA
TGGAGAAGTATCTACAATTTCTTCAAAGATTGATACTGAGCCCTTATCAAAACCAAAGCTAGATCCTGAACAATTGCCAG
TTAGACCAAAGTCAGTAGACCTTGATGCCTTGGTAGCCAGGAACTCAAAAGAAACAGATAATGTAAATTTTGATGACATA
GCTTCCTCAGAGAACTTGTTACATCTCACTGCAAATAGACCCAAGATGCCTGGAAGAAGATTGCCTGGCCGCTTCAATGG
TGGACATTCTCCAACCCAGAGCCCAGAAAAAACCTTGAAGCTCCCAAAAGATGATGATAGTGGCAACATAAAGCCGTCGG
AGTTTAAGAAGGATGCAGGCTACTCTTCAAAGCCATCTCTTTCAGCACCTTCAAGTGCTTCTAAAGTAAATACAGCTGCT
TTCCTAAGTCCATTAGAGCTCAAAGCTAAAGTAGAAGCCGATGATGGGAAAAAAAGCTCCCTGGATGAACTTAGAGCCCA
GATTATTGAATTATTGTGCATTGTAGATGCACTGAAAAAGGATCATGGGAAAGAACTGGAAAAGCTACGCAGAGAACTAG
AAGAAGAGAAGGCCATGCGAAGTAACCTAGAGGTGGAAATAGCAAAGCTCAAGAAAGCTGTTCTGTTGTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 15 .17 RPM |
| SRP017611_kidney | 100 .35 RPM |
| SRP017611_liver | 36 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000009776 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000061665 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005026 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2040 | 75.12 | 64.05 | Please wait, loading  |
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Download FASTA sequences of all ENSRNOG00000011987 retrocopies