Parental gene:

Taf8, ENSRNOG00000015249

Aliases:Taf8, Tbn
Description:transcription initiation factor TFIID subunit 8 [Source:RefSeq peptide;Acc:NP_001101667]
Organism:Rat (Rattus norvegicus)
Coordinates:9:14436066..14450890(+)


>ENSRNOG00000015249
ATGGCTGACACGGCCACCGGGCCTGGTGGCTCCGGAACGAGACCAGGAAATAAACAGTCCACTAACCCGGCTGATAACTA
CCATCTGGCCCGGAGGAGGACCCTGCAAGTGGTTGTGAGCTCTTTGCTGACAGAGGCGGGATTTGAGAGCGCGGAGAAAG
CATCTGTGGAGACGTTGACAGAGATGCTGCAGAGCTACATCTCAGAAATTGGGAGAAGCGCCAAGTCATACTGCGAGCAC
ACAGCCAGGACCCAGCCCACGCTGTCGGACATCGTGGTCACACTGGTTGAAATGGGGTTCAATGTTGACACTCTGCCTGC
TTATGCAAAACGATCTCAGAGGATGGTCATCACTGCACCTCCGGTGACCAATCAGCCAGTGACACCCAAGGCCCTCACTG
CAGGGCAGAACCGACCTCACCCGCCACACATCCCCAGCCATTTTCCTGAATTTCCGGATCCACACACGTACATAAAAACT
CCGACGTACCGTGAGCCAGTGTCTGACTACCAGGTCCTCCGAGAGAAGGCCGCGTCTCAGAGGCGAGACGTGGAGCGAGC
ACTCACCCGCTTCATGGCCAAGACAGGCGAGACCCAGAGTCTCTTCAAGGATGACGTCAGCACTTTCCCCTTGATTGCAG
CCAGACCTTTCACCATCCCCTACCTCACGGCCTTGCTCCCCTCCGAGCTGGAGATACAGCAGATGGAAGAGACAGACTCC
TCGGAGCAGGACGAGCAGACAGATACCGAGAACATCGCGCTCCATATCAGCACGGACGAATCCGGAGCTGAGAAGGAGAA
CACTTCTGTCCTGCAGCAGAACTCCTCCTTGTCCGGCAGCCGGAACGGGGAGGAGAGCACCATTGATAACCCCTATCTGC
GGCCCGTGAAGAAGCCCAAGATCCGGAGGAAGAAGTCCCTCTCGTGA

Library Parental gene expression (RPM)
SRP017611_brain 17 .83 RPM
SRP017611_kidney 17 .86 RPM
SRP017611_liver 9 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010516 ortholog_one2one 1 retrogene
retro_chof_661,
Macropus eugenii ENSMEUG00000006952 ortholog_one2one 1 retrogene
retro_meug_150,
Microcebus murinus ENSMICG00000011353 ortholog_one2one 6 retrogenes
retro_mmur_112, retro_mmur_1455, retro_mmur_443, retro_mmur_455, retro_mmur_554, retro_mmur_555,
Monodelphis domestica ENSMODG00000012785 ortholog_one2many 2 retrogenes
retro_mdom_1206, retro_mdom_1357,
Mus musculus ENSMUSG00000023980 ortholog_one2one 1 retrogene
retro_mmus_436,
Otolemur garnettii ENSOGAG00000016885 ortholog_one2one 1 retrogene
retro_ogar_759,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2317 93.83 100.00
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Download FASTA sequences of all ENSRNOG00000015249 retrocopies