Parental gene:

Phyh, ENSRNOG00000018044

Aliases:None
Description:Phytanoyl-CoA dioxygenase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:P57093]
Organism:Rat (Rattus norvegicus)
Coordinates:17:78953405..78970294(-)


>ENSRNOG00000018044
ATGGACTATACGCGCGCTGGTGCCCGGCTGCAGGTCCTTCTGGGACACCTTGGCCGACCCTCGGCCCTTCAGATTGTAGC
CCACCCCGTATCAGGGCCGGCTTCCCCTGCCAATTTCTGTCCTGAACAATTCCAGTATACTTTGGACAATAATGTCCTCA
GCCTGGAGCAGAGAAAATTTTATGAAGAAAACGGGTTTCTCGTCATTAAAAATCTGGTATCGGATGATGATATTCAACGG
TTTCGAGCAGAGTTTGAAAGAATCTGCAGAAAGGAGGTGAAACCACCAGGGATGACTGTAATGAAAGACGTGGCCATTGC
GAAGCAGGGTTATGCGCCAAGTGAGAGGGTGGTTACGAAGATCCAGGATTTCCAACAAAATGAGGAGCTCTTCAGATACT
GTGCCCTGCCCCAGATTGTGAAATACGTGGAGTGCTTCACTGGACCCAATATTATGGCTATGCACACAATGCTGATCAAC
AAGCCTCCGGATTCTGGCAAGAAGACATCCCGGCATCCCTTGCATCAGGATCTGCACTTTTTCCCCTTCCGACCCAGCAA
CCTAATTGTTTGTGCTTGGACAGCCATGGAGCACATCGACAGGAACAATGGCTGTCTTGTTGTGCTCCCTGGTACCCACA
AAGGTCCCCTGAAGCCACATGATTACCCCAAGTGGGAGGGAGGAGTTAACAAAATGTACCATGGCATCCAAGACTATGAC
CCAGACAGCCCCCGCGTCCACTTGGTGATGGAAAAGGGCGACACAGTTTTCTTCCATCCCCTGCTCATCCATGGATCTGG
TCGGAACAGAACTCAAGGATTCAGGAAAGCAATCTCCTGCCACTATGGCAGCTCCGACTGCAAATATATCAGCGTGAAGG
GCACCAGTCAAGAAAACATTGCGAGGGAAGTTATTGAGATTGCGGAGAAACGTTATGGAGTCCAAGGAGCCCTGGACTTT
GAGGACACTTGGAAGTTTCGATGCCGACTTGTGAAAGGAGAAAGAATAAACCTTTGA

Library Parental gene expression (RPM)
SRP017611_brain 46 .01 RPM
SRP017611_kidney 196 .44 RPM
SRP017611_liver 887 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002160 ortholog_one2one 1 retrogene
retro_chof_334,
Cavia porcellus ENSCPOG00000007582 ortholog_one2one 1 retrogene
retro_cpor_161,
Tursiops truncatus ENSTTRG00000011113 ortholog_one2one 1 retrogene
retro_ttru_1844,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_542 69.01 50.30
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Download FASTA sequences of all ENSRNOG00000018044 retrocopies