Parental gene: | Fus, ENSRNOG00000023360 |
| Aliases: | None |
| Description: | RNA-binding protein FUS [Source:RefSeq peptide;Acc:NP_001012137] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:206435551..206449420(+) |
>ENSRNOG00000023360
ATGGCTTCAAACGACTATACCCAACAAGCAACTCAAAGCTATGGGGCCTATCCTACCCAGCCTGGGCAGGGCTATTCCCA
ACAGAGCAATCAGCCCTATGGCCAGCAGAGTTACAGTGGTTATGGCCAATCAGCTGACACTTCAGGATACGGCCAGAGCA
GCTATGGTTCTTCTTATGGACAGACCCAAAACACAGGCTATGGAACTCAGTCAGCACCCCAGGGATATGGTTCCACTGGT
GGCTATGGCAGCAGCCAAAGTTCCCAGTCTTCTTATGGGCAGCAGTCCTCCTACCCCGGTTATGGCCAACAGCCAGCTCC
TAGTAGCACCTCAGGAAGTTATGGTGGAAGTTCTCAGAGCAGCAGCTATGGGCAGCCCCAGAGTGGAGGCTATGGTCAAC
AGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAGCAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAG
AACCAGTACAACAGCAGCAGTGGAGGTGGTGGAGGGGGTGGTGGAGGCAACTATGGCCAAGATCAGTCCTCTATGAGTGG
CGGCGGCGGTGGTGGTGGTTATGGCAATCAGGACCAGAGTGGTGGCGGCGGTGGTGGCTACGGGGGAGGCCAGCAGGATC
GTGGGGGCCGTGGCAGGGGCGGTGGAGGTGGTTACAACCGAAGCAGTGGTGGCTATGAACCCAGAGGCCGTGGAGGTGGC
CGAGGAGGCAGAGGCGGCATGGGCGGAAGTGACCGTGGTGGCTTCAATAAATTTGGTGGTCCTCGGGATCAAGGATCTCG
TCATGATTCTGAACAGGATAATTCAGACAATAATACCATCTTCGTGCAAGGCCTAGGCGAGAATGTTACAATTGAATCTG
TGGCGGATTACTTCAAGCAGATTGGAATTATTAAGACAAACAAGAAAACTGGACAGCCTATGATTAATTTGTATACAGAC
AGAGAAACTGGCAAGTTGAAGGGTGAGGCAACAGTCTCATTTGATGACCCACCTTCTGCTAAAGCTGCAATCGACTGGTT
TGATGGAAAAGAATTCTCTGGGAATCCTATTAAAGTTTCATTTGCTACCCGGCGTGCTGACTTCAACCGGGGTGGTGGAA
ATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCTATGGAGGAGGTGGCAGCGGTGGTGGTGGCCGG
GGAGGATTTCCCAGTGGAGGTGGTGGAGGTGGAGGACAGCAACGAGCTGGGGACTGGAAGTGTCCTAATCCTACATGTGA
GAACATGAACTTCTCTTGGAGAAGTGAATGCAACCAGTGTAAGGCACCTAAGCCAGATGGCCCAGGAGGGGGACCAGGAG
GCTCTCATATGGGGGGAAACTACGGAGATGATCGGCGTGGCAGAGGAGGATATGATCGGGGCGGCTACCGGGGCCGAGGA
GGGGACCGAGGGGGCTTCAGAGGGGGCCGGGGTGGTGGGGACAGAGGTGGTTTTGGCCCTGGCAAGATGGACTCCAGGGG
TGAGCACAGACAGGATCGCAGGGAGAGGCCATATTAG
ATGGCTTCAAACGACTATACCCAACAAGCAACTCAAAGCTATGGGGCCTATCCTACCCAGCCTGGGCAGGGCTATTCCCA
ACAGAGCAATCAGCCCTATGGCCAGCAGAGTTACAGTGGTTATGGCCAATCAGCTGACACTTCAGGATACGGCCAGAGCA
GCTATGGTTCTTCTTATGGACAGACCCAAAACACAGGCTATGGAACTCAGTCAGCACCCCAGGGATATGGTTCCACTGGT
GGCTATGGCAGCAGCCAAAGTTCCCAGTCTTCTTATGGGCAGCAGTCCTCCTACCCCGGTTATGGCCAACAGCCAGCTCC
TAGTAGCACCTCAGGAAGTTATGGTGGAAGTTCTCAGAGCAGCAGCTATGGGCAGCCCCAGAGTGGAGGCTATGGTCAAC
AGTCTGGCTATGGTGGACAGCAACAAAGCTACGGACAGCAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAG
AACCAGTACAACAGCAGCAGTGGAGGTGGTGGAGGGGGTGGTGGAGGCAACTATGGCCAAGATCAGTCCTCTATGAGTGG
CGGCGGCGGTGGTGGTGGTTATGGCAATCAGGACCAGAGTGGTGGCGGCGGTGGTGGCTACGGGGGAGGCCAGCAGGATC
GTGGGGGCCGTGGCAGGGGCGGTGGAGGTGGTTACAACCGAAGCAGTGGTGGCTATGAACCCAGAGGCCGTGGAGGTGGC
CGAGGAGGCAGAGGCGGCATGGGCGGAAGTGACCGTGGTGGCTTCAATAAATTTGGTGGTCCTCGGGATCAAGGATCTCG
TCATGATTCTGAACAGGATAATTCAGACAATAATACCATCTTCGTGCAAGGCCTAGGCGAGAATGTTACAATTGAATCTG
TGGCGGATTACTTCAAGCAGATTGGAATTATTAAGACAAACAAGAAAACTGGACAGCCTATGATTAATTTGTATACAGAC
AGAGAAACTGGCAAGTTGAAGGGTGAGGCAACAGTCTCATTTGATGACCCACCTTCTGCTAAAGCTGCAATCGACTGGTT
TGATGGAAAAGAATTCTCTGGGAATCCTATTAAAGTTTCATTTGCTACCCGGCGTGCTGACTTCAACCGGGGTGGTGGAA
ATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCTATGGAGGAGGTGGCAGCGGTGGTGGTGGCCGG
GGAGGATTTCCCAGTGGAGGTGGTGGAGGTGGAGGACAGCAACGAGCTGGGGACTGGAAGTGTCCTAATCCTACATGTGA
GAACATGAACTTCTCTTGGAGAAGTGAATGCAACCAGTGTAAGGCACCTAAGCCAGATGGCCCAGGAGGGGGACCAGGAG
GCTCTCATATGGGGGGAAACTACGGAGATGATCGGCGTGGCAGAGGAGGATATGATCGGGGCGGCTACCGGGGCCGAGGA
GGGGACCGAGGGGGCTTCAGAGGGGGCCGGGGTGGTGGGGACAGAGGTGGTTTTGGCCCTGGCAAGATGGACTCCAGGGG
TGAGCACAGACAGGATCGCAGGGAGAGGCCATATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 51 .17 RPM |
| SRP017611_kidney | 70 .90 RPM |
| SRP017611_brain | 118 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000000968 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004806 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000019637 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000030795 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_913 | 59.37 | 74.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1439 | 61.86 | 80.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2727 | 80.62 | 98.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2894 | 95.99 | 91.12 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000023360 retrocopies