Parental gene: | SMARCD2, ENSSHAG00000013118 |
| Aliases: | None |
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:11107] |
| Organism: | Tasmanian devil (Sarcophilus harrisii) |
| Coordinates: | GL856832.1:1168767..1178005(-) |
>ENSSHAG00000013118
ATGTCTGGCCGCGGCGCGGGGGGGTTCCCGCTGCCCCCGCTAAGCCCCGGCGGGGGGGCGGTAGGCAGTCACATAGGTGC
GTGTGCTCCCAGGGTGGGAAAGGCGCTCTTAGTAACCAAGATCACCAGAATGGAGGGGATGGGTGGAAGGCCCTGTCGAG
CATACCCACTAACCTATGCCCCGACTGTTCCACTTTCCCTACAGCGCCCTGGTATGTCTCCAGGAAGCAGGATGCCTATG
GGTGGCCTACAGGTGGGACCTCCGGCTGGCACTCCCTTTGGCACAGCTTCTCCACTTCGGCCTGGGATGCCCTCTGCTAT
GATGGACCCATTCCGGAAACGTCTGCTTGTGCCACAGCCTCAGCCTCCAATGCCCACCCAACGCCGAGGGCTGAAGAGAA
GAAAGATGGCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCTAGTCCCAGAGTCTCAGGCATACATGGACCTCTTGGCC
TTTGAGCGTAAACTAGACCAAACAATTGCTCGTAAACGAATGGAGATCCAGGAGGCCATCAAGAAACCATTGACGCAAAA
ACGAAAGCTTCGAATCTACATTTCTAACACCTTTAGCCCCAGCAAGGCAGAAGGTGAAGGGGCAGGAGCTTCGGGGGCCA
CAGTGGGAGCCCCAGGGTCAGTTCCAGCAGGGGACAAAGTAGCCTCCTGGGAACTTCGAGTGGAAGGGAAGCTACTGGAT
GATCCCAGCAAACAGAAGAGGAAGTTTTCTTCATTTTTTAAGAGTCTGGTCATAGAGCTAGACAAGGAGCTTTATGGACC
TGATAACCATCTGGTGGAGTGGCACCGTTTGCCTACAACCCAAGAGACAGATGGCTTCCAAGTGAAACGCCCTGGGGACC
TTAATGTTAAGTGTACTCTCCTGCTTATGTTGGATCATCAGCCACCCCAGTACAAGCTGGACCCTCGGTTGGCTCGGCTG
CTTGGTGTGCACACCCAGACCCGGGCTGCCATCATGCAGGCACTGTGGCTGTACATTAAGCACAACCAGTTGCAAGATGG
GCACGAGCATGAATATATCAACTGTAACCGCTACTTTCGCCAGATCTTTAGCTGTGGGCGTCTTCGTTTCTCTGAGATAC
CCATGAAACTGGCTGGGCTACTACAACATCCAGACCCCATTGTCATCAATCATGTTATCAGTGTGGACCCCAATGACCAG
AAGAAGACGGCTTGTTATGATATTGATGTTGAGGTAGATGATCCACTCAAGGCACAGATGAGCAACTTTCTAGCTTCCAC
CACCAACCAACAGGAGATTGCATCCCTGGATGTTAAGATCCATGAAACTATTGAGTCCATCAACCAGCTGAAGACTCAGA
GGGATTTCATGCTCAGTTTCAGCACTGACCCACAGGACTTCATTCAGGAATGGCTGCGTTCTCAGCGCCGAGATCTCAAG
ATCATCACAGATGTGATAGGTAACCCAGAGGAAGAAAGGCGAGCTGCCTTCTACCATCAGCCCTGGGCTCAGGAAGCTGT
AGGGAGGCACATTTTTGCCAAGGTGCAGCAGCGCAGGCAGGAACTGGAACAGGTGCTAGGAATCCGCCTGACCTAG
ATGTCTGGCCGCGGCGCGGGGGGGTTCCCGCTGCCCCCGCTAAGCCCCGGCGGGGGGGCGGTAGGCAGTCACATAGGTGC
GTGTGCTCCCAGGGTGGGAAAGGCGCTCTTAGTAACCAAGATCACCAGAATGGAGGGGATGGGTGGAAGGCCCTGTCGAG
CATACCCACTAACCTATGCCCCGACTGTTCCACTTTCCCTACAGCGCCCTGGTATGTCTCCAGGAAGCAGGATGCCTATG
GGTGGCCTACAGGTGGGACCTCCGGCTGGCACTCCCTTTGGCACAGCTTCTCCACTTCGGCCTGGGATGCCCTCTGCTAT
GATGGACCCATTCCGGAAACGTCTGCTTGTGCCACAGCCTCAGCCTCCAATGCCCACCCAACGCCGAGGGCTGAAGAGAA
GAAAGATGGCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCTAGTCCCAGAGTCTCAGGCATACATGGACCTCTTGGCC
TTTGAGCGTAAACTAGACCAAACAATTGCTCGTAAACGAATGGAGATCCAGGAGGCCATCAAGAAACCATTGACGCAAAA
ACGAAAGCTTCGAATCTACATTTCTAACACCTTTAGCCCCAGCAAGGCAGAAGGTGAAGGGGCAGGAGCTTCGGGGGCCA
CAGTGGGAGCCCCAGGGTCAGTTCCAGCAGGGGACAAAGTAGCCTCCTGGGAACTTCGAGTGGAAGGGAAGCTACTGGAT
GATCCCAGCAAACAGAAGAGGAAGTTTTCTTCATTTTTTAAGAGTCTGGTCATAGAGCTAGACAAGGAGCTTTATGGACC
TGATAACCATCTGGTGGAGTGGCACCGTTTGCCTACAACCCAAGAGACAGATGGCTTCCAAGTGAAACGCCCTGGGGACC
TTAATGTTAAGTGTACTCTCCTGCTTATGTTGGATCATCAGCCACCCCAGTACAAGCTGGACCCTCGGTTGGCTCGGCTG
CTTGGTGTGCACACCCAGACCCGGGCTGCCATCATGCAGGCACTGTGGCTGTACATTAAGCACAACCAGTTGCAAGATGG
GCACGAGCATGAATATATCAACTGTAACCGCTACTTTCGCCAGATCTTTAGCTGTGGGCGTCTTCGTTTCTCTGAGATAC
CCATGAAACTGGCTGGGCTACTACAACATCCAGACCCCATTGTCATCAATCATGTTATCAGTGTGGACCCCAATGACCAG
AAGAAGACGGCTTGTTATGATATTGATGTTGAGGTAGATGATCCACTCAAGGCACAGATGAGCAACTTTCTAGCTTCCAC
CACCAACCAACAGGAGATTGCATCCCTGGATGTTAAGATCCATGAAACTATTGAGTCCATCAACCAGCTGAAGACTCAGA
GGGATTTCATGCTCAGTTTCAGCACTGACCCACAGGACTTCATTCAGGAATGGCTGCGTTCTCAGCGCCGAGATCTCAAG
ATCATCACAGATGTGATAGGTAACCCAGAGGAAGAAAGGCGAGCTGCCTTCTACCATCAGCCCTGGGCTCAGGAAGCTGT
AGGGAGGCACATTTTTGCCAAGGTGCAGCAGCGCAGGCAGGAACTGGAACAGGTGCTAGGAATCCGCCTGACCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012708 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000019528 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000014835 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000006988 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_shar_464 | 81.62 | 50.47 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSHAG00000013118 retrocopies