Parental gene:

PRKAG1, ENSSSCG00000000185

Aliases:None
Description:Sus scrofa protein kinase, AMP-activated, gamma 1 non-catalytic subunit (PRKAG1), mRNA. [Source:RefSeq mRNA;Acc:NM_001001642]
Organism:Pig (Sus scrofa)
Coordinates:5:15443376..15522457(-)


>ENSSSCG00000000185
ATGAAGTCTCATCGCTGCTATGACCTGATTCCCACAAGCTCAAAATTGGTTGTATTTGATACCTCCCTGCAGGTGAAGAA
AGCTTTCTTTGCTTTGGTGACTAATGGTGTCCGAGCTGCCCCTTTATGGGATAGTAAGAAGCAAAGTTTCGTGGGCATGC
TGACCATCACTGATTTCATCAATATCCTGCACCGCTACTATAAATCAGCCTTGGTACAGATCTATGAGCTGGAAGAACAC
AAGATAGAAACTTGGAGAGAGGTGTACCTACAGGACTCCTTTAAACCGCTTGTCTGCATTTCTCCTAATGCCAGCTTGTT
TGATGCTGTCTCTTCATTAATTCGAAACAAGATCCACAGGCTGCCAGTTATTGACCCAGAGTCCGGGAACACCTTGTACA
TCCTCACCCACAAGCGCATCCTCAAGTTCCTCAAGCTGTTTATCACTGAGTTCCCCAAGCCCGAGTTCATGTCTAAGTCT
CTGGAAGAGCTACAGATTGGCACCTATGCCAACATTGCTATGGTCCGCACTACCACCCCTGTCTATGTGGCTCTGGGCAT
CTTTGTACAGCACCGAGTCTCAGCCCTGCCAGTGGTGGATGAAAAAGGGCGTGTGGTGGACATCTACTCCAAGTTTGATG
TTATCAACCTGGCAGCAGAAAAGACCTACAACAACCTAGATGTATCTGTGACCAAAGCCCTGCAACATCGATCACATTAC
TTTGAAGGTGTCCTCAAGTGCTACCTGCATGAGACCCTGGAAACCATCATCAACAGGCTGGTAGAAGCAGAGGTTCACCG
ACTTGTAGTGGTGGATGAGAATGACGTGGTCAAGGGAATTGTATCGCTGTCTGACATCCTGCAGGCCCTGGTGCTCACAG
GAGGAGAGAAGCCCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 26 .94 RPM
SRP014902_testis 44 .56 RPM
SRP018856_adipose 93 .67 RPM
SRP018288_kidney 35 .76 RPM
SRP018288_lung 47 .04 RPM
SRP018288_liver 26 .70 RPM
SRP018288_heart 47 .25 RPM
SRP035408_liver 33 .96 RPM
SRP035408_brain 49 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006964 ortholog_one2one 2 retrogenes
retro_amel_1722, retro_amel_406,
Choloepus hoffmanni ENSCHOG00000006397 ortholog_one2many 1 retrogene
retro_chof_32,
Callithrix jacchus ENSCJAG00000020827 ortholog_one2one 2 retrogenes
retro_cjac_3045, retro_cjac_3892,
Felis catus ENSFCAG00000000091 ortholog_one2one 1 retrogene
retro_fcat_1730,
Myotis lucifugus ENSMLUG00000011156 ortholog_one2one 2 retrogenes
retro_mluc_2417, retro_mluc_451,
Oryctolagus cuniculus ENSOCUG00000008409 ortholog_one2one 1 retrogene
retro_ocun_829,
Tursiops truncatus ENSTTRG00000004730 ortholog_one2one 1 retrogene
retro_ttru_497,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_210 84.81 78.86
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Download FASTA sequences of all ENSSSCG00000000185 retrocopies