Parental gene:

UBA2, ENSSSCG00000002876

Aliases:None
Description:ubiquitin-like modifier activating enzyme 2 [Source:HGNC Symbol;Acc:30661]
Organism:Pig (Sus scrofa)
Coordinates:6:39552416..39569262(+)


>ENSSSCG00000002876
ATGGCACTGTCGCGGGGGCTGCCCCGGGAGCTGGCCGAGGCCGTGGCCGGCGGCCGGGTCCTGGTGGTGGGCGCGGGAGG
CATCGGCTGCGAGCTCCTTAAAAACCTTGTGCTCACCGGCTTCTCACACATCGACCTGATTGATCTGGATACTATTGATG
TCAGCAACCTCAACAGACAGTTTTTGTTTCAAAAGAAACATGTTGGAAGATCAAAGGCTCAGGTTGCCAAAGAAAGTGTA
CTGCAGTTTTACCCGAAAGCTAATATCATAGCCTACCATGACAGCATCATGAACCCTGACTATAATGTGGAATTTTTTCG
ACAATTTATATTGGTTATGAATGCTTTAGATAACAGAGCTGCCCGCAACCATGTTAATAGAATGTGTCTAGCAGCTGATG
TCCCTCTTATTGAGAGTGGAACTGCTGGTTATCTTGGGCAAGTAACCACTATCAAAAAGGGTGTGACTGAGTGTTACGAA
TGTCATCCCAAACCAACCCAGAGAACTTTTCCCGGCTGTACAATTCGTAACACACCTTCAGAACCTATTCATTGCATCGT
TTGGGCGAAATATTTGTTCAACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCTGACCCTG
AAGCTTCCTGTGAGTACAGTATTTGGGATATATTTTCTTATTTGTATGTACTG

Library Parental gene expression (RPM)
SRP014902_placenta 5 .84 RPM
SRP014902_testis 27 .02 RPM
SRP018288_heart 12 .89 RPM
SRP018288_kidney 12 .61 RPM
SRP018288_liver 8 .64 RPM
SRP018288_lung 13 .44 RPM
SRP018856_adipose 10 .21 RPM
SRP035408_brain 7 .59 RPM
SRP035408_liver 6 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011975 ortholog_one2one 3 retrogenes
retro_chof_1034, retro_chof_548, retro_chof_848,
Myotis lucifugus ENSMLUG00000003047 ortholog_one2many 1 retrogene
retro_mluc_286,
Monodelphis domestica ENSMODG00000011934 ortholog_one2one 1 retrogene
retro_mdom_1509,
Pongo abelii ENSPPYG00000009837 ortholog_one2one 1 retrogene
retro_pabe_304,
Rattus norvegicus ENSRNOG00000021113 ortholog_one2one 1 retrogene
retro_rnor_939,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_941 83.25 89.61
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Download FASTA sequences of all ENSSSCG00000002876 retrocopies