Parental gene: | RRAS, ENSSSCG00000003183 |
| Aliases: | None |
| Description: | related RAS viral (r-ras) oncogene homolog [Source:HGNC Symbol;Acc:10447] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 6:50409603..50413754(-) |
>ENSSSCG00000003183
ATGAGCAGCGGGGCGGCGTCCGGGACAGGGCGGGGGCGGCCCCGGGGCGGGGGGCCGGGACCCGGGGACCCCCCACCCAG
CGAGACACACAAGCTGGTGGTCGTGGGCGGCGGCGGCGTGGGCAAGAGCGCGCTGACCATCCAGTTCATCCAGTCCTACT
TCGTGTCTGACTACGATCCCACTATTGAAGACTCCTACACCAAGATCTGCACCGTGGATGGCGTCCCGGCCCGGCTGGAC
ATCCTGGACACCGCAGGCCAGGAGGAGTTCGGTGCCATGCGAGAGCAGTACATGCGCGCCGGCCACGGCTTCCTGCTGGT
GTTTGCCATTAATGATCGGCAGAGTTTCAACGAGGTGGGCAAGCTCTTCACGCAGATCCTCCGAGTCAAGGACCGAGATG
ACTTCCCCATCGTGTTGGTCGGGAACAAGGCAGATCTGGAGACACAGCGTCAGGTTCCCAGATCCGAAGCCTCGGCCTTC
AGCAACTCCCACCACGTGGCCTACTTCGAGGCCTCGGCCAAACTGCGCCTCAACGTGGACGAGGCCTTTGAGCAGCTGGT
GCGCGCCGTCCGGAAGTTCCAGGAACAGGAGCTCCCACCCAGCCCGCCCAGCGCCCCCAGGAAGAAGGACAGGAGCTGCC
CCTGCATCCTCCTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 61 .19 RPM |
| SRP014902_testis | 20 .51 RPM |
| SRP018288_heart | 30 .15 RPM |
| SRP018288_kidney | 16 .15 RPM |
| SRP018288_liver | 14 .39 RPM |
| SRP018288_lung | 57 .02 RPM |
| SRP018856_adipose | 171 .02 RPM |
| SRP035408_brain | 10 .42 RPM |
| SRP035408_liver | 21 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000010243 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000005524 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_201 | 61.05 | 86.24 | Please wait, loading  |
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| 2. | retro_sscr_570 | 70.34 | 63.76 | Please wait, loading |
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Download FASTA sequences of all ENSSSCG00000003183 retrocopies