Parental gene: | ENSSSCG00000004465 |
| Aliases: | None |
| Description: | Sus scrofa branched chain keto acid dehydrogenase E1, beta polypeptide (BCKDHB), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001123219] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 1:96603029..96716539(-) |
>ENSSSCG00000004465
ATGGCGGCAGTGGCAGCGGCAGCGGCGGTTGCTGTGGGACGGCTACTGCGGCTCCGGGTGGCCCGGGTGGAGGGACACTG
GCATCCCCTGAGTGGCGGGGGGCTGCTGCGGGGCTTCCTGCAACCTGCCTCAGCCGACGGGGATGCGGCCCAGAAGCGGC
AGGTGGCTCACTTCACTTTCCAGCCCGACCCGGAGACCGTGGAGTACGGGCAAACTCAGAAAATGAATCTCTTCCAGGCA
GTAACAAGTGCCTTGGATAACTCATTGGCCAAAGATCCTACTGCAGTAATATTTGGTGAAGATGTGGCCTTTGGTGGAGT
CTTTAGATGTACTGTTGGCTTGCGAGACAAGTATGGTAAAGATAGAGTTTTTAATACCCCACTGTGTGAACAGGGAATTG
TTGGATTTGGAATCGGGATTGCAGTCACTGGTGCTACTGCCATTGCGGAAATTCAGTTTGCAGATTATATTTTCCCTGCT
TTTGATCAGATAGTTAATGAAGCTGCCAAGTATCGTTATCGCTCTGGGGATCTCTTTAATTGTGGCAGCCTCACGATCCG
GTCCCCTTGGGGCTGTGTCGGCCATGGGGCTCTCTATCATTCCCAGAGTCCTGAAGCATTCTTTGCCCACTGCCCAGGAA
TCAAGGTGGTTGTACCCAGAAGCCCTTTCCAAGCTAAGGGACTTCTCTTGTCATGCATAGAGGATAAAAATCCTTGTATA
TTTTTTGAACCTAAAATACTTTACAGAGCAGCAGTGGAACAGGTTCCCATAGAACCATACACTATCCCTCTGTCCCAGGC
CGAAGTCATCCAAGAAGGGAGTGATGTGACTCTTGTTGCCTGGGGCACTCAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 0 .93 RPM |
| SRP014902_testis | 52 .05 RPM |
| SRP018288_heart | 16 .79 RPM |
| SRP018288_kidney | 41 .47 RPM |
| SRP018288_liver | 31 .82 RPM |
| SRP018288_lung | 2 .65 RPM |
| SRP018856_adipose | 3 .75 RPM |
| SRP035408_brain | 5 .27 RPM |
| SRP035408_liver | 48 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000000645 | ortholog_many2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000006573 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_653 | 69.48 | 73.24 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSSSCG00000004465 retrocopies