Parental gene:

OAT, ENSSSCG00000010734

Aliases:None
Description:ornithine aminotransferase [Source:HGNC Symbol;Acc:8091]
Organism:Pig (Sus scrofa)
Coordinates:14:145318779..145341081(+)


>ENSSSCG00000010734
ATGTTTTCCAAACTAGCCCATCTGCAGACCGTCACTCTCCTTCGTCGTGGCGTTCATTCTACAGTGGCTTCTGCGACGTC
TGTTGCAACGAAAAGAACCATCCAAGGGCCTCCATCCTCTGATTACATTTTTGAGCGGGAAGCTAAATATGGGGCCCACA
ACTACCATCCTTTACCTGTGGCCCTGGAGAGAGGGAAAGGTGTTTACGTTTGGGATGTAGAAGGCAGGAGATACTTCGAC
TTCCTGAGTGCCTACAGCGCTGTGAACCAAGGGCACTGCCACCCAAAGATCGTGAACGCTCTGAAACGTCAGGTGGACAA
ACTGACCCTGACGTCGAGGGCTTTCTACAATGATGTGCTCGGGGAATACGAAGAGTACATTACGAAGCTTTTCAACTACC
ACAAGGTCCTGCCTATGAATACAGGGGTGGAGGCTGGAGAGACTGCCTGCAAAATCGCTCGTAGATGGGGCTATACGGTG
AAGGGTATCCCAAAATACAAAGCAAAGATCATTTTTGCAGCTGGAAACTTTTGGGGAAGAACGTTGTCTGCGATCTCCAG
TTCCACAGACCCCACCAGTTACGACGGGTTTGGACCATTTATGCCAGGTTTCGAAATCATTCCATATAGCGATCTGCCTG
CTCTCGAGCGCGCGCTTCAGGATCCAAACGTTGCTGCGTTCATGGTAGAGCCAATTCAGGGTGAAGCTGGCGTCGTGGTT
CCGGATCCAGGCTACCTCGTGGGCGTGCGCGAGCTCTGCACCCAGCACCAGGTTCTGTTTATTGCTGACGAAATACAAAC
AGGATTGGCCAGAACTGGTAGATGGCTGGCTGTTGATCATGAAAATGTCAGACCTGATATCATCCTTCTGGGAAAGGCAC
TTTCTGGTGGCTTATACCCTGTCTCCGCGGTGCTGTGTGATGATGAAATAATGCTGACCATTAAGCCAGGGGAACATGGG
TCAACGTATGGTGGCAATCCCCTGGGCTGCCGAGTGGCCATCGCAGCCCTTGAGGTTTTGGAAGAAGAAAACCTTGCTGA
AAATGCCGAGAAGATGGGTACCATCTTGAGAAATGAACTCATGAAGCTCCCTTCTGACATCGTAACGACCGTACGAGGGA
AAGGATTACTGAATGCGATTGTTATTAGAGAAACCAAAGATTACGACGCTTGGAAGGTGTGTCTGCGACTTCGAGATAAT
GGACTTCTGGCCAAGCCAACCCACGGCGATATCATCAGATTTGCGCCTCCGCTTGTGATCAAGGAGGATGAGATTCTGGA
GTCGGTGGAAATCATTAACAAGACCGTCTTGTCTTTCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 17 .12 RPM
SRP014902_testis 119 .52 RPM
SRP018856_adipose 217 .74 RPM
SRP018288_kidney 66 .59 RPM
SRP018288_lung 180 .84 RPM
SRP018288_liver 77 .72 RPM
SRP018288_heart 97 .78 RPM
SRP035408_liver 130 .02 RPM
SRP035408_brain 119 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012633 ortholog_one2one 1 retrogene
retro_cjac_2462,
Homo sapiens ENSG00000065154 ortholog_one2one 1 retrogene
retro_hsap_4828,
Gorilla gorilla ENSGGOG00000000848 ortholog_one2one 1 retrogene
retro_ggor_3010,
Macropus eugenii ENSMEUG00000005655 ortholog_one2one 1 retrogene
retro_meug_613,
Mus musculus ENSMUSG00000030934 ortholog_one2one 1 retrogene
retro_mmus_3475,
Nomascus leucogenys ENSNLEG00000000482 ortholog_one2one 2 retrogenes
retro_nleu_2176, retro_nleu_503,
Pongo abelii ENSPPYG00000002737 ortholog_one2one 2 retrogenes
retro_pabe_2989, retro_pabe_3754,
Pan troglodytes ENSPTRG00000003028 ortholog_one2one 1 retrogene
retro_ptro_3213,
Tursiops truncatus ENSTTRG00000004225 ortholog_one2one 1 retrogene
retro_ttru_87,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1181 77.36 58.77
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Download FASTA sequences of all ENSSSCG00000010734 retrocopies