Parental gene:

ISOC1, ENSSSCG00000014258

Aliases:None
Description:isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:24254]
Organism:Pig (Sus scrofa)
Coordinates:2:137198379..137219941(+)


>ENSSSCG00000014258
ATGGCGGCGGCAGAGCCGGCGGTCCCGGCGCTCCCGGGCGGCGGCGCGGGCGCGGGGGCGCCGTCGGGTACGGTCCCCGT
GCTCTTCTGCTTCTCCGTCTTCGCGCGGCCCTCGGCCGTGCCGCACGGCGCGGGTTACGAGCTGCTTATCCAGAAGTTCC
TCAGCCTGTACGGCGACCAGATCGACATGCACCGCAAATTCGTGGTGCAGCTCTTCGCGGAGGAGTGGGGCCAGTACGTG
GACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGGTGCGCCTCGTGCCGCTGCAGATCCAGCTCACTACCCTGGG
AAATCTTACACCTTCAAGCACTGTGTTTTTCTGCTGTGATATGCAGGAAAGGTTCAGACCAGCCATCAAGTATTTTGGAG
ATATTATTAGTGTGAGCCAAAGATTGTTACAAGGGGCCCGGATTTTAGGAATTCCAGTTATCGTAACAGAACAGTACCCT
AAAGGTCTTGGAAGCACTGTTCAAGAAATCGATTTAACAGGAGTAAAACTGGTTCTTCCCAAGACCAAGTTTTCGATGGT
ATTACCAGAAGTAGAAGCAGCATTAGCAGAGATTCCTGGAGTCCGGAGTGTTGTGTTATTTGGAGTGGAAACTCATGTGT
GCATCCAGCAAACAGCTCTGGAGCTCGTTGGCCGAGGTATCGAGGTTCATATCGTTGCTGACGCCACGTCATCAAGAAGC
ATGATGGACAGGATGTTTGCTCTTGAGCGTCTTGCTCGAACTGGGATCATAGTGACGACAAGTGAGGCGGTCCTGCTACA
GCTGGTGGCTGATAAAGACCATCCAAAATTCAAGGAAATTCAGAATCTAATTAAGGCGAGTGCTCCAGAGTCGGGTCTGC
TCTCCAAAGTATAG

Library Parental gene expression (RPM)
SRP014902_placenta 31 .72 RPM
SRP014902_testis 25 .04 RPM
SRP018288_heart 99 .95 RPM
SRP018288_kidney 30 .93 RPM
SRP018288_liver 69 .24 RPM
SRP018288_lung 42 .56 RPM
SRP018856_adipose 149 .51 RPM
SRP035408_brain 19 .76 RPM
SRP035408_liver 54 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006851 ortholog_one2one 1 retrogene
retro_chof_1203,
Oryctolagus cuniculus ENSOCUG00000017498 ortholog_one2one 1 retrogene
retro_ocun_449,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_421 81.13 53.20
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2. retro_sscr_443 81.13 53.20
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Download FASTA sequences of all ENSSSCG00000014258 retrocopies