Parental gene: | CHEK1, ENSSSCG00000015215 |
| Aliases: | None |
| Description: | checkpoint kinase 1 [Source:HGNC Symbol;Acc:1925] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 9:58412541..58443926(+) |
>ENSSSCG00000015215
ATGGCAGTGCCCTTTGTGGAAGACTGGGACTTGGTGCAAACCCTGGGAGAAGGTGCCTATGGAGAAGTTCAACTTGCTGT
GAATAGAAGAACTGAGGAAGCAGTTGCAGTGAAGATTGTAGACATGAAGCGTGCCATAGACTGTCCAGAAAATATTAAAA
AAGAGATCTGTATCAATAAAATGTTAAATCATGAGAATGTAGTGAAATTCTATGGGCACAGAAGAGAAGGCAATATCCAG
TATTTATTTCTGGAGTACTGTAGTGGGGGAGAACTTTTTGATAGAATAGAGCCAGACATAGGCATGCCTGAACAAGATGC
TCAGAGGTTCTTCCATCAACTCATGGCAGGGGTGGTTTATCTGCATGGTATTGGAATAACTCACAGGGATATTAAGCCAG
AAAATCTCCTATTGGATGAAAGGGGTTTAGATAACCTCAAAATCTCTGACTTCGGCTTGGCAACCGTTTTTCGGCACAAT
AATCGTGAGCGTTTATTGAACAAGATGTGTGGTACTTTACCATATGTTGCTCCAGAGCTTCTGAAGAGAAAAGAATTTCA
TGCAGAACCAGTTGATGTTTGGTCCTGTGGAATAGTACTTACTGCAATGTTGGCTGGAGAATTGCCGTGGGACCAGCCTA
GTGATAGTTGTCAGGAATATTGTGATTGGAAAGAAAAAAAAACATACCTCAACCCTTGGAAAAAAATCGATTCTGCTCCT
CTAGCCCTGCTGCATAAAATCCTAGTTGAGAATCCATCAGTAAGGATTACCATCCCAGACATCAAAAAAGATAGATGGTA
CAACAAACCACTTAAGAAAGGGGCAAAGAGGCCCCGAGTCACTTCAGGTGGTGTATCAGAGTCTCCTAGTGGATTCTCTA
AGCATATTCAATCCAATTTGGACTTCTCTCCAGTCAATAGTGCTTCTAGTGAAGAAAATGTGAAGTACTCCAGTTCTCAG
CCAGAACCACGGACAGGTCTTTCGTTATGGGACACTAGCCCTTCATACATTGATAAACTGGTACAAGGGATCAGTTTTTC
CCAGCCCACATGCCCTGATCATATGCTCCTGAATAGTCAGTTACTCGGCACCCCAGGATCCTCACAGAACCCCTGGCAGC
GCCTGGTCAAAAGAATGACACGATTTTTTACCAAACTGGATGCAGACAAATCTTATCAGTGCCTAAAAGAGACCTGTGAG
AAATTGGGCTATCAATGGAAGAAAAGTTGTATGAATCAGGTTACTGTATCAACAACTGATAGAAGAAACAATAAACTGAT
TTTCAAAGTGAATTTGGTAGAAATGGATGAGAAGATTTTGGTTGACTTCCGGCTTTCTAAGGGTGATGGATTGGAATTCA
AGAGACACTTCCTGAAGATTAAAGGGAAGCTAAGTGATGTTGTAAGCAGCCAGAAGGTTTCGCTTCCGGCCACATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 0 .80 RPM |
| SRP014902_testis | 7 .64 RPM |
| SRP018288_heart | 1 .47 RPM |
| SRP018288_kidney | 2 .36 RPM |
| SRP018288_liver | 0 .64 RPM |
| SRP018288_lung | 3 .26 RPM |
| SRP018856_adipose | 1 .04 RPM |
| SRP035408_brain | 0 .95 RPM |
| SRP035408_liver | 3 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000026175 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_859 | 90.72 | 60.04 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000015215 retrocopies