Parental gene: | NOM1, ENSSSCG00000016411 |
| Aliases: | None |
| Description: | nucleolar protein with MIF4G domain 1 [Source:HGNC Symbol;Acc:13244] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 18:1738317..1748782(-) |
>ENSSSCG00000016411
ATGGCGGCGTCCAAGACAGCGGGTGCGGCGCCTGGGGTAGGCTTCCCGCGGCGCATGGCCCGCAGGAAACGCGGAGCCGG
ACGCGGGCCTGGGGGCGGCAGGGATGGGGCCCTGAAGCGGCTAAAACTGGCTGTGGAGGAGTTCGTGCAGGCGACCTCGA
AGGGCGAGACCCCCGGCGGCTGCGAGGGGCCCGCGGTGCAGGGTCGCAGGCGCCCGGGCGGGAGGAAAAGCCGCAGGGAA
CTGAGGAAGGAGAAGCGGCACCTGAGGAAGGCGCGCCGGCTCCAGCGGACTGCAGGCCCCAGGCAGGGCCCGGGCTCGGG
CGGCGGAGCCGGGGGAGAGAGCGGGCCGCGGGCAGAGGCGGAGCAGAGGAAGGGCGGCCGGCCGGCCCCGCGGGCTTCAG
AGGGGCTGCCTCCTCCCCCGGCCCAGGCCTCCTTGGTCCGGGCCCCGGCGCCCCCTGCCCCGGCCCGGCGGCCCCCCGGG
AGGACCACGGCCCCCGCAGCTGCCGCCGCCGCTGCGCGGAAACGGGCACTTCTGGCGGCCAACGAAGAGGAAGACCGGGA
GATCCGAAAGCTGGAGCGGTGCCTCGGCTTGAACAAGCGCAGAAAGAAGGGCGACGGGAGCTCCGTGCCGCTCAGCTTTG
CGCGCGACGGGCTCGACTACATTCTGGGAGCCCTGGCGTCTGGGAGAAACAGTGGCTTATATGAAAGCAGCGGGGAGGAG
GAGGAGGAGGAAGAGGAGGCGGGACAGACGGCCCCCGAAAGTGATGTAGAGAGTGACCCAGAGGACGACCGGGAGGAGGA
GGACGTGGGAGAGGAGAGCGAGGGCGAGTTGGGAGCGCAGAGCGAGGACGAGGAGGGAGAGGAGGACGAGGAGGAGGACA
TGGAGGCGGGTGAAGACGACCAAGAAGAGGAAGAGCGAAAAGCAGGAGGAGCCGAAGGGAGAGCGGAGGAGAAAGGGAGG
AAAAAGAGAGTCCGTTTTGCTGAAGATGGAGAGAGGAGTGAAAATGCGTCAAAGGATGTTAGCACAACCGACCAGAGTCT
TTGTGAAAATGGTGGAAAGTACATCCCACCTCACGTGAGGCGAGCAGAGGAGACGGTGGATGCTCAGAGAAAGGAAGCCC
TGGAAAGGCTAAAGAAACAGGTCAAAGGTCTGATGAACAGGTTGAGCGAGCCGAACGTGGCCTCCATAAGCGGCCAGCTG
GAGGAGCTGTACATGGCGCACAGCCGGAAGGACATGAGCGACACGGTGACGGATGTCCTCCTGAGCGCCTGCGCCCCCGC
CGAGGCCATGCCCGGCAGGCTGCTGATGGAGCACGTGCTCCTGGTCAGCATCCTGCACCGCACGGTCGGGATCGAGGTCG
GCGCCCACTTTCTGGAGGCCGTGGTGAGGCGCTTTGACAACGTCTACCGGAGCGGCCGTGAGGGGAAGGAGTGCGACAAC
CTGCTCACCATCATCGCCCACTTGTACAACTTCCACGTGGTGCAGGCGTGCCTCATCTTTGACGTTTTGAGGAAACTCGT
TGGAACGTTCACCGAAAAAGACATCGAACTGATCCTGCTGATGCTGAGAAACGTGGGCTTCTCGCTGAGAAAAGACGATG
CTCTGTCCCTTAAGGAGCTGATCACGGAGACCCAGGCCAGAGCCAGCGAGGCCGGCGGCCGGTTCCGGGACCAGACCAGG
GTCCGGTTCATGCTGGAGACCCTGCTGGCCCTGAAGAACAACGACGTGCGGAAGATCCCGGGCTACGACCCCGAGCCGGT
GGAGAGGCTGCGCAAGCTGCAGAGAGCCCTGGTGCGCGGCGCTGGCTCAGGGACGGAAACCCAGCTGCGAGTGTCCTGGG
ACAGCGTCCTGAACGCCGAGCGGACCGGGCGCTGGTGGATCGTGGGGTCTGCGTGGAGCGGTGCCCCGATGATTGATGGG
GGTCAGCAGAAGACCCCGCCGAAGCCGCTCACGGGGACGGTCAGCGCGAAAATACTAGAACTTGCCCGAAAGCAGAGAAT
GAACACCGACATCCGGAGAAACATATTCTGCACCATCATGACGAGTGAAGATTTCCTGGACGCCTTCGAGAAGCTTCTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 10 .35 RPM |
| SRP014902_testis | 25 .60 RPM |
| SRP018288_heart | 4 .30 RPM |
| SRP018288_kidney | 6 .99 RPM |
| SRP018288_liver | 6 .56 RPM |
| SRP018288_lung | 11 .51 RPM |
| SRP018856_adipose | 45 .48 RPM |
| SRP035408_brain | 16 .86 RPM |
| SRP035408_liver | 14 .30 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_213 | 62.50 | 53.25 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000016411 retrocopies