Parental gene:

GPS2, ENSSSCG00000017940

Aliases:None
Description:G protein pathway suppressor 2 [Source:HGNC Symbol;Acc:4550]
Organism:Pig (Sus scrofa)
Coordinates:3:139940649..139943478(-)


>ENSSSCG00000017940
ATGCCTGCGCTCCTGGAGCGCCCCAAGCTTTCCAACGCCATGGCCAGGGCGTTGCACCGGCACATCATGATGGAGCGGGA
GCGCAAGCGGCAGGAGGAAGAAGAGGTGGACAAGATGATGGAACAAAAGATGAAGGAAGAGCAGGAGAGAAGGAAAAAAA
AGGAAATGGAAGAGAGAATGTCACTAGAGGAGACCAAGGAACAAATCCTGAAGTTGCAGGAGAAGCTTTCGGCCCTCCAG
GAAGAGAAGCACCAGCTTTTCCTGCAGCTCAAGAAAGTTTTACATGAGGAAGAAAAACGGAGGCGGAAGGAGCAGAGTGA
CCTGACCACTCTGACATCGGCAGCATACCAGCAAGGCCTGACTGTTCACACAGGAACTCACCTCCTCAGCATGCAGGGGA
GCCCCGGAGGACACAATCGGCCAGGCACCCTCATGGCAGCTGACAGAGCCAAACAGATGTTCGGCCCCCAAGTGCTTACA
AACCGACACTACGTGGGCTCAGCAGCTGCTTTCGCAGGGACCCCGGAGCATGGGCAGTTCCAAGGCAGCCCCGGCGGCGC
CTATGGGACTGCTCAGCCCCCACCTCACTATGGACCCACCCAGCCTGCCTATAGTCCTAGTCAGCAGCTCAGAGCACCTT
CGGCATTTCCTGCAGTGCAGTACCTGTCTCAGCCACAGCCACAGCCCTATGCTGTGCACAGCCACTTTCAGCCCACCCAG
ACAGGCTTCCTCCAGCCCGGTGGCGCCCTGTCCTTACAAAAGCAGATGGAACACGCTAACCAACAAACTGGCTTCTCTGA
CTCATCCTCCCTACGCCCCATGCATCCCCAAGCTCTGCATCCAGCCCCTGGACTGCTTGCCTCACCCCAGCTCCCTGTGC
AGATGCAACCAGCAGGAAAGTCGGGCTTTGCAACCACCAGCCAGCCTGGCCCTCGGCTCCCCTTCATCCAGCACAGCCAG
AACCCGCGATTCTACCACAAGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 48 .85 RPM
SRP014902_testis 41 .59 RPM
SRP018288_heart 19 .62 RPM
SRP018288_kidney 34 .97 RPM
SRP018288_liver 21 .91 RPM
SRP018288_lung 87 .37 RPM
SRP018856_adipose 45 .63 RPM
SRP035408_brain 67 .30 RPM
SRP035408_liver 33 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016576 ortholog_one2one 2 retrogenes
retro_amel_1236, retro_amel_362,
Equus caballus ENSECAG00000010635 ortholog_one2one 2 retrogenes
retro_ecab_124, retro_ecab_480,
Homo sapiens ENSG00000132522 ortholog_one2one 2 retrogenes
retro_hsap_2738, retro_hsap_4222,
Gorilla gorilla ENSGGOG00000001672 ortholog_one2many 1 retrogene
retro_ggor_1907,
Macropus eugenii ENSMEUG00000010645 ortholog_one2one 2 retrogenes
retro_meug_1327, retro_meug_182,
Myotis lucifugus ENSMLUG00000026169 ortholog_one2one 1 retrogene
retro_mluc_1045,
Mus musculus ENSMUSG00000023170 ortholog_one2one 1 retrogene
retro_mmus_1476,
Nomascus leucogenys ENSNLEG00000009364 ortholog_one2one 2 retrogenes
retro_nleu_2477, retro_nleu_600,
Pan troglodytes ENSPTRG00000023046 ortholog_one2one 1 retrogene
retro_ptro_1852,
Pteropus vampyrus ENSPVAG00000005052 ortholog_one2one 1 retrogene
retro_pvam_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_742 65.95 55.05
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Download FASTA sequences of all ENSSSCG00000017940 retrocopies