Parental gene:

ENSSSCG00000030273

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:13:72811827..72817304(-)


>ENSSSCG00000030273
ATGTTACTGATGTCACTATTATTTTACCTTTTATATTTTGTAGCAGTCTACAAAATTCATTGTTCAGATGCTGAAGCCCC
TTTCTTTTGTCCCCACAGCAAATTGTCCTGGGGCTTGCCCATAGATACTGTTCAATGGGATATCTGCAAACTGCCATTAA
GAACTGGTTCTGTGGACATTATTGTAACAGACATGCCATTTGGAAAAAGGATGGGTTCCAAGAAGAGAAACTGGGACCTT
TATCCAGCTTGCCTACGGGAGATGAGCCGTGTCTGTAGACCAGGGACAGGCCGAGCTGTACTACTGACTCAGGACAAGAA
GTGCTTTACTAAGGCATTATCCGCAATGGGACATGTATGGCGGAAGGTGCATACTGTCTGGGTGAACATAGGGGGACTTC
ATGCTGCAGTTTATCTTCTGAAACGTACACCTCAAACTTTTGTTCATCCTTCAGAACAAGATGGAGGAAGATCTCCTTGG
TAA

Library Parental gene expression (RPM)
SRP014902_placenta 15 .93 RPM
SRP014902_testis 26 .87 RPM
SRP018288_heart 12 .31 RPM
SRP018288_kidney 19 .70 RPM
SRP018288_liver 13 .59 RPM
SRP018288_lung 17 .62 RPM
SRP018856_adipose 8 .15 RPM
SRP035408_brain 19 .44 RPM
SRP035408_liver 13 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000008538 ortholog_one2one 1 retrogene
retro_mluc_1991,
Macaca mulatta ENSMMUG00000017307 ortholog_one2many 1 retrogene
retro_mmul_1600,
Otolemur garnettii ENSOGAG00000017111 ortholog_one2many 1 retrogene
retro_ogar_3452,
Tupaia belangeri ENSTBEG00000003450 ortholog_one2many 7 retrogenes
retro_tbel_2328, retro_tbel_2589, retro_tbel_3717, retro_tbel_4362, retro_tbel_4489, retro_tbel_4567, retro_tbel_969,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_873 66.35 62.50
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000030273 retrocopies