Parental gene: | AAT1, PRUPE_ppa003107mg |
| Aliases: | None |
| Description: | amino acid transporter 1 [Source:Projected from Arabidopsis thaliana (AT4G21120) TAIR;Acc:AT4G21120] |
| Organism: | Peach (Prunus persica) |
| Coordinates: | scaffold_4:4408310..4411507(+) |
>PRUPE_ppa003107mg
ATGGTGGCCAGCGGTACGGAGGCGAGCGGCGGAGGAGATGAGGGGCTACGGAGGAGAGGGTGCACTTACCGAAAGTACGA
TTTTCTGCCCGAGGAGTCGTTCCAGACCTGGGGCAATTACGTAAAAGCGCTGAGCCAGACTCCGGGTCGGTTTAAGGACC
GGGTCTTGACCCGGTCCTTGGACAGTACGGAGTTGGTGGAGATGAAGGCGCAGAGCCATAACGAGATGAAGAAGACGCTC
AACTGGTGGGACCTCATCTGGTTCGGAATCGGCGCCGTCATAGGAGCCGGAATATTCGTGCTCACCGGCCTCGAGGCGAA
GAAGCACGCCGGCCCCGCCGTCGTCTTATCCTACGTCGTTTCTGGCGTCTCCGCCTTGCTTTCGGTTTTCTGTTACACCG
AGTTCGCGGTTGAGATTCCGGTTGCAGGTGGCTCATTTGCCTACCTAAGAGTAGAGCTTGGAGACTTTACGGCCTTCATT
GCAGCAGGCAACATCCTCCTTGAATATGTCATAGGTGGTGCAGCTGTTGCTCGTTCCTGGACCTCCTACTTCGCCACTCT
CTGCAACCACAACTCCAATGATTTTCGGATCGTTGCTCCCGGTTTGGGGGAGAACTACAAGTACCTCGACCCCATTGCTG
TTGTTGTCATTATTGGTATCTGCTTTCTCGCTGTCCTCAGCACAAAGGGCTCTTCTCGTCTCAACTACATTGCCTCAATT
GTTCATGTCATTGTCATTCTCTTCATTATCATAGCCGGCCTCACCAAAGCCGATACCAAGAACTACGAGAAATTTGCCCC
TTTTGGCCCCCGCGGCGTCTTCCAGGCATCAGCTGTTCTGTTTTTCGCCTATGTTGGATTTGATGCTGTTTCAACTATGG
CTGAAGAAACCAAGAATCCTGGCAAGGACATCCCAATTGGCCTTGTTGGCTCAATGGTCATTACCACGTTCGTTTATTGC
TTGTTAGCAGTGACTTTATGCCTTATGCAGCCATATGGCAGTATCGACGAACAAGCTCCATTTTCAGTAGCGTTTGAAGC
TGTTGGGATGGGATGGGCTAAGTACGTCGTGGCGGCGGGAGCTCTGAAAGGCATGACAAGTGTGTTGCTTGTTGGGGCGG
TTGGCCAGGCTCGCTATCTCACTCACATTGCTAGAACTCATATGGTGCCTCCATGGTTTGCCCAAGTTGATGGCAAAACA
GGCACCCCTGTCAATGCCACAGTCACCATGCTTTCAGCCACTGCATTCATTGCCTTCTTCTCAAGCCTTGACGTTTTGGC
TAGTCTTCTCTCCATCTCCACATTGTTCATCTTCAGCCTTGTAGCGATTGCGCTTCTCGTTCGCCGCTACTATGTCAGCG
GCGTCACGACTCAGGCCACCAGGAACAAGTTCATTGCCTGCCTTGTCCTCATAGTTGGTTCTTCAATTGCCACCTCTGTG
TATTGGAGTAAAACAGATAAGTGGACTGCCTACGTGGTAACCGCGCCTCTTTGGTTCTTGGGTACGTTGGGGATTTGGAT
ACTTGTCCCACAAGCAAGGAGCCCTAAGCTTTGGGGGGTGCCATTGGTGCCGTGGTTGCCATCTCTGTCAGTTGCCATCA
ATATTTTCCTACTTGGGTCAATCGATCGTGACTCATTCATAAGGTTTGCAGCGTGGACTTTGATCATCCTGGTTTACTAC
TTTTTCTTTGGATTGCATGCTTCTTACGACACAGCAAAGGACTCTCTAGCAAAGCGGTTGGAGGCCGCAGCAAGAGACTC
CGGGTTAGACGGCAAAAGTGGCAGCAATACCTCTGCACATCCTGCTAGTTAA
ATGGTGGCCAGCGGTACGGAGGCGAGCGGCGGAGGAGATGAGGGGCTACGGAGGAGAGGGTGCACTTACCGAAAGTACGA
TTTTCTGCCCGAGGAGTCGTTCCAGACCTGGGGCAATTACGTAAAAGCGCTGAGCCAGACTCCGGGTCGGTTTAAGGACC
GGGTCTTGACCCGGTCCTTGGACAGTACGGAGTTGGTGGAGATGAAGGCGCAGAGCCATAACGAGATGAAGAAGACGCTC
AACTGGTGGGACCTCATCTGGTTCGGAATCGGCGCCGTCATAGGAGCCGGAATATTCGTGCTCACCGGCCTCGAGGCGAA
GAAGCACGCCGGCCCCGCCGTCGTCTTATCCTACGTCGTTTCTGGCGTCTCCGCCTTGCTTTCGGTTTTCTGTTACACCG
AGTTCGCGGTTGAGATTCCGGTTGCAGGTGGCTCATTTGCCTACCTAAGAGTAGAGCTTGGAGACTTTACGGCCTTCATT
GCAGCAGGCAACATCCTCCTTGAATATGTCATAGGTGGTGCAGCTGTTGCTCGTTCCTGGACCTCCTACTTCGCCACTCT
CTGCAACCACAACTCCAATGATTTTCGGATCGTTGCTCCCGGTTTGGGGGAGAACTACAAGTACCTCGACCCCATTGCTG
TTGTTGTCATTATTGGTATCTGCTTTCTCGCTGTCCTCAGCACAAAGGGCTCTTCTCGTCTCAACTACATTGCCTCAATT
GTTCATGTCATTGTCATTCTCTTCATTATCATAGCCGGCCTCACCAAAGCCGATACCAAGAACTACGAGAAATTTGCCCC
TTTTGGCCCCCGCGGCGTCTTCCAGGCATCAGCTGTTCTGTTTTTCGCCTATGTTGGATTTGATGCTGTTTCAACTATGG
CTGAAGAAACCAAGAATCCTGGCAAGGACATCCCAATTGGCCTTGTTGGCTCAATGGTCATTACCACGTTCGTTTATTGC
TTGTTAGCAGTGACTTTATGCCTTATGCAGCCATATGGCAGTATCGACGAACAAGCTCCATTTTCAGTAGCGTTTGAAGC
TGTTGGGATGGGATGGGCTAAGTACGTCGTGGCGGCGGGAGCTCTGAAAGGCATGACAAGTGTGTTGCTTGTTGGGGCGG
TTGGCCAGGCTCGCTATCTCACTCACATTGCTAGAACTCATATGGTGCCTCCATGGTTTGCCCAAGTTGATGGCAAAACA
GGCACCCCTGTCAATGCCACAGTCACCATGCTTTCAGCCACTGCATTCATTGCCTTCTTCTCAAGCCTTGACGTTTTGGC
TAGTCTTCTCTCCATCTCCACATTGTTCATCTTCAGCCTTGTAGCGATTGCGCTTCTCGTTCGCCGCTACTATGTCAGCG
GCGTCACGACTCAGGCCACCAGGAACAAGTTCATTGCCTGCCTTGTCCTCATAGTTGGTTCTTCAATTGCCACCTCTGTG
TATTGGAGTAAAACAGATAAGTGGACTGCCTACGTGGTAACCGCGCCTCTTTGGTTCTTGGGTACGTTGGGGATTTGGAT
ACTTGTCCCACAAGCAAGGAGCCCTAAGCTTTGGGGGGTGCCATTGGTGCCGTGGTTGCCATCTCTGTCAGTTGCCATCA
ATATTTTCCTACTTGGGTCAATCGATCGTGACTCATTCATAAGGTTTGCAGCGTGGACTTTGATCATCCTGGTTTACTAC
TTTTTCTTTGGATTGCATGCTTCTTACGACACAGCAAAGGACTCTCTAGCAAAGCGGTTGGAGGCCGCAGCAAGAGACTC
CGGGTTAGACGGCAAAAGTGGCAGCAATACCTCTGCACATCCTGCTAGTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Leersia perrieri | LPERR12G15690 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pper_6 | 63.32 | 98.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PRUPE_ppa003107mg retrocopies