RetrogeneDB ID: | retro_etel_956 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_190627:3111..3417(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TMEM220 | ||
Ensembl ID: | ENSETEG00000015072 | ||
Aliases: | None | ||
Description: | transmembrane protein 220 [Source:HGNC Symbol;Acc:33757] |
Percent Identity: | 70.59 % |
Parental protein coverage: | 74.26 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | KSVSAVHLSVCVVWALGLGYYLSLHSQQSILHEEEGRELSGLAIIAAWIILCHGSSKNPVGGRIQLTIAI |
KS.SA.HL.VCVV.AL.L..Y..LHSQQ..LHEE.GRELS.L.IIA.W..LCH.SSKN.VG..IQL.IAI | |
Retrocopy | KSISAEHLLVCVVGALDL*HYILLHSQQDFLHEEDGRELSVLVIIAVWMSLCHSSSKNTVGEIIQLVIAI |
Parental | IISLFPLII-WGYIYIHEDMRSSWPTHCKTVI |
IISL.P..I..G.IYI.E.MRSSWPTHCKTVI | |
Retrocopy | IISLIPILISRGRIYINEEMRSSWPTHCKTVI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000003958 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000015072 | 1 retrocopy |
retro_etel_956 ,
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