RetrogeneDB ID: | retro_meug_1993 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold77523:11206..11425(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AP2S1 | ||
Ensembl ID: | ENSMEUG00000001062 | ||
Aliases: | None | ||
Description: | adaptor-related protein complex 2, sigma 1 subunit [Source:HGNC Symbol;Acc:565] |
Percent Identity: | 68.92 % |
Parental protein coverage: | 81.32 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | ICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLML |
I.V.V.DN.L.Y...I..F.EV..EYFH.VCEL.L..N..KVYTVVDEMFLAG.I.ETSQ.KVLKQLLML | |
Retrocopy | IFVTVSDN-LIYPDTICIFLEVFKEYFHIVCELNLISNL*KVYTVVDEMFLAGKIQETSQMKVLKQLLML |
Parental | QSLE |
.SLE | |
Retrocopy | LSLE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000008394 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000001062 | 2 retrocopies |
retro_meug_1156, retro_meug_1993 ,
|
Macropus eugenii | ENSMEUG00000016245 | 3 retrocopies | |
Macropus eugenii | ENSMEUG00000016580 | 11 retrocopies | |
Mus musculus | ENSMUSG00000008036 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000015865 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000012548 | 1 retrocopy |