>retro_mluc_1583
AGAAGAATCCTGGACTAGCACCTTTCCATCTCCACCTCCCAGTTCAAGAAGAAAAGGACATCAACGATGTCTTTCTTTTC
CAGGATCTCTTGGAAACTGAGGTTCTAGAAGAGGGAGCCTCTGAAGAATGTGTTTTTCCTCTTGACAGAAAGAGCCCCCG
GATCCAGTGCTAAAAAGTGTCACATGTCAATGAAAGGCCTAGGAACCATGGCCTGTGAGAACCCCAACAAGATGAGAAAG
TACAAGAAAATTGTCCTAGACCTGCTGGTGCATGGATTGTATGATCCCGTGAGTTCTGAAGTCACCTGCATGAGCAGGAA
GACTCTGACCATCATCCTGGGCAAGATCCAGGGGGAAGGTTTGGGCTCTTCATAGACATCACTCTTCAGACCAGGACTCT
ACTAGATGCCAACAGGGACAGCCTGAGACACTCAGCCTTTGTCTCACTTGGGCAATTGGCTGCTTTTGCTGGGTGGAAAT
GGAAGAAAATTTTCACCAATCATATTAAGCAAACTCAAGATTCCCTCCTAATCCATTTACAGGATAGAAATCTCCAGGTT
GCCAAGGCTTGCAAAACCACATTTCGGGCCTGTTCTCCCTGTCTGAGACAAAGGTGGGAACACAGCTTCCAGAGTGAAGA
AGAGCAAAAGAACCTCAAGCTCTGCCCGCAGCTGAGCCACTATCACCCAGTGCTTCTGCAGTACTTCTACACAAATAAAA
TCCTG
ORF - retro_mluc_1583 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
72.54 % |
Parental protein coverage: |
97.98 % |
Number of stop codons detected: |
2 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | RRILGQPLSMPTAQPKKKRTPMMSFFSKVSWKLRFQKREHLKNVLYILAERARDPSAKKRHMAVRGLGTM |
| RRIL...LS..T.Q.KKKRT..MSFFS..SWKLRF.KRE.LKNV...L.ERA...SAKK.HM...GLGTM |
Retrocopy | RRILD*HLSISTSQFKKKRTSTMSFFSRISWKLRF*KREPLKNVFFLLTERAPGSSAKKCHMSMKGLGTM |
|
Parental | ACENPDKVRKYKKVVLDMLVHGLYDPMSSEVIHESLKTLTIIL-GKIQGKGLGSFFIDITLQTRTLLDDE |
| ACENP.K.RKYKK.VLD.LVHGLYDP.SSEV...S.KTLTIIL.G...G...G..FIDITLQTRTLLD.. |
Retrocopy | ACENPNKMRKYKKIVLDLLVHGLYDPVSSEVTCMSRKTLTIIL<GQDPGGRFG-LFIDITLQTRTLLDAN |
|
Parental | NDSLRYSAFVLFGQLPAFAGRKWKKFFIDQVKQTQDSLLIHLQDRNPQVAKACKTTFRACSPYLRQRKER |
| .DSLR.SAFV..GQL.AFAG.KWKK.F....KQTQDSLLIHLQDRN.QVAKACKTTFRACSP.LRQR.E. |
Retrocopy | RDSLRHSAFVSLGQLAAFAGWKWKKIFTNHIKQTQDSLLIHLQDRNLQVAKACKTTFRACSPCLRQRWEH |
|
Parental | SFQSEDDQRNPKLCRQLSLYHPELLQYFYANKIL |
| SFQSE..Q.N.KLC.QLS.YHP.LLQYFY.NKIL |
Retrocopy | SFQSEEEQKNLKLCPQLSHYHPVLLQYFYTNKIL |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Myotis lucifugus was not studied using RNA-Seq expression data.
Myotis lucifugus was not studied using ChIP-Seq data.
Myotis lucifugus was not studied using EST data.
Myotis lucifugus was not studied using FANTOM5 data.
retro_mluc_1583 was not experimentally validated.
Retrocopy orthology:
Myotis lucifugus does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
2 parental genes, and
2 retrocopies.