>retro_mluc_2155
CACATAGACATTTACACAGATGTAGACGAAGAGTTCAGCCAGGAAGCTGAATATGGTGGGCATGATCAGATAGATTTGTG
TGATGATGTCATCTCTCCATCCGAAAATAATGGAGATGCCCCAGAAGACCGGGATTACATGGATACTCCCCCACCAGCTG
TTGGTGATGATGTGGGTAAAGGAGCAGCACCAAATGTTGTCTATACATATACGGGAAAGAGAATTGCATTATATATTAGA
AATCTAACATGGTGGACAACAGATGAAGACTTAACTGAAGCACTGCATTCTTTGGGAGTAAATGATATTTTGGAGATAAA
GTTTTTTGAAAACCGAGCAAATGGCCAATCTAAGGGGTTTGCCCTTGTTGGTGTTGGATCTGAAGCATCCTCAAAAAAGT
TAATGGATCTGTTGCCTAAAAGAGAACTTCATGGTCAGAATCCTGTTGTAACTCCATGCAATAAACAGTTCCTGAGTCAA
TTTGAAATGCAGTCCAGGAAAACTACACAATCAGGACAAATGTCTGGGAAAGGTAAAGCTGTCCTCCAGGAGGCAGTTCA
CGTGCAGCATCAGCATTCCCACAAGGTGGTAGAGGACGGGGCTGTTTTCCAGGGGCTGTTCCTGGTGGGGACAGATTTCC
TGGGTCAGCAGGACCAGGAGGGCCACCCCCACCTCTTCCAGCTGGACAGACTCCATCATGTCCACCCTTAGGTTCTCCAG
GCCCACCTGGTCCACCAGGTCCACCTCCACCTGGTCAGGTTCTGCCTCCTCCTTTAGCTGGGCCTCCTAATCGAGGAGAT
CGCCCTCCACCGCCAGTTCTTTTTCCTGGACAACCTTTTGGGCAGCCTCCTTTGGGTCCGCTTCCGCCTGGTCCTCCACC
TCCAGTTCCAGGCTACAGTCCACCTCCAGGCCCCTTTCCACCTCATCCACCTGGTCCTCTTGGACCACCCCTTACACTTG
CTCCTCCTCCGCATCTTCCTGGACCACCTCCAGGTGCCCCACCGCCAGCTCCACATGTGAACCCAGCTTTCTTTCCTCCA
CCA
ORF - retro_mluc_2155 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
81.2 % |
Parental protein coverage: |
64.5 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | YVNIFLDLQPMKNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTY |
| ...I..D......QEAEYGGHDQIDL.DDVISPS.NNGDAPEDRDYMDT.PP.VGDDVGKGAAPNVVYTY |
Retrocopy | HIDIYTDVDEEFSQEAEYGGHDQIDLCDDVISPSENNGDAPEDRDYMDTPPPAVGDDVGKGAAPNVVYTY |
|
Parental | TGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPK |
| TGKRIALYI.NLTWWTTDEDLTEA.HSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPK |
Retrocopy | TGKRIALYIRNLTWWTTDEDLTEALHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPK |
|
Parental | RELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKA-GPPGGSSRA--AFPQGGRGRGRFPGAVPG |
| RELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSG.GKA..PPGGSSRA..AFPQGGRGRG.FPGAVPG |
Retrocopy | RELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGKGKA<CPPGGSSRAASAFPQGGRGRGCFPGAVPG |
|
Parental | GDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQP |
| GDRFPG.AGPGGPPPP.PAGQTP..PPLG...........PPGQVLPPPLAGPPNRGDRPPPPVLFPGQP |
Retrocopy | GDRFPGSAGPGGPPPPLPAGQTPSCPPLGSXXXXXXXXXXPPGQVLPPPLAGPPNRGDRPPPPVLFPGQP |
|
Parental | FGQPPLGPLPPGPPPPVPGYGPPPGP-PPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP |
| FGQPPLGPLPPGPPPPVPGY.PPPGP.PP...GP..PP....P.P..P..PP....P.PH....P...PP |
Retrocopy | FGQPPLGPLPPGPPPPVPGYSPPPGPFPPHPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHV--NPAFFPP |
|
Parental | P |
| P |
Retrocopy | P |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Myotis lucifugus was not studied using RNA-Seq expression data.
Myotis lucifugus was not studied using ChIP-Seq data.
Myotis lucifugus was not studied using EST data.
Myotis lucifugus was not studied using FANTOM5 data.
retro_mluc_2155 was not experimentally validated.
Retrocopy orthology:
Myotis lucifugus does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
3 parental genes, and
5 retrocopies.