RetrogeneDB ID: | retro_mmur_410 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_2875:605039..605358(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ORAOV1 | ||
Ensembl ID: | ENSMICG00000003061 | ||
Aliases: | None | ||
Description: | oral cancer overexpressed 1 [Source:HGNC Symbol;Acc:17589] |
Percent Identity: | 76.64 % |
Parental protein coverage: | 77.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AGSQDMFDAIVMADERFHGEGYQEGYEEGSSLGIIEGRQYGTLHGAKIGSEIGCYQGFAIAWKCLLHSCA |
AGSQD..DA.V.ADERF.GEGY.EGYEEGSSLG.I.GRQYG.L.GAKIGSEIGC.QGFA.A.KCL.H.C. | |
Retrocopy | AGSQDALDALVTADERFRGEGYEEGYEEGSSLGLIKGRQYGALQGAKIGSEIGCCQGFAVARKCLSHGCD |
Parental | TEKDSR-KMKVLESLIGMIQRFPYDDPTYDKLHEDLD |
.EK.SR.KM.VLESLIG..Q.FP.DDPTYDKLHEDL. | |
Retrocopy | PEKGSR>KMNVLESLIGVMQKFPHDDPTYDKLHEDLE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000001983 | 1 retrocopy | |
Felis catus | ENSFCAG00000026606 | 1 retrocopy | |
Homo sapiens | ENSG00000149716 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000003061 | 1 retrocopy |
retro_mmur_410 ,
|
Tursiops truncatus | ENSTTRG00000017307 | 6 retrocopies |