RetrogeneDB ID: | retro_mputfur_964 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896982.1:7898601..7899075(+) | ||
Located in intron of: | ENSMPUG00000005217 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PLA2G12A | ||
Ensembl ID: | ENSMPUG00000008637 | ||
Aliases: | None | ||
Description: | phospholipase A2, group XIIA [Source:HGNC Symbol;Acc:18554] |
Percent Identity: | 78.62 % |
Parental protein coverage: | 95.78 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MALLPRHALAFVLLLFVPAALRCQEQAQTTDWRATLKTIRNGVHKIDTYLNAALDLLGGEDGLCQYKCND |
MA.LP..ALA.V.LLFV..ALRCQEQAQTT.WRATLKTI.NGVHK.D..LNAA.DLLGGEDGLCQYKCN. | |
Retrocopy | MAVLPLPALALVILLFVSTALRCQEQAQTTYWRATLKTIQNGVHKVDM*LNAAWDLLGGEDGLCQYKCNK |
Parental | GSKPFPRYGYKPSPPNGCGSPLFGVHLNIGIPSLTKCCNQHDRCYETCGKSKNDCDEEFQYCLSKICRDV |
GSKPFP.Y.Y.PS..NGCGSPLFGVHLNIGIPSLTKCCNQH.RCY.T..KS.NDC.EEFQ..LSKI.RDV | |
Retrocopy | GSKPFPGYDYNPS-LNGCGSPLFGVHLNIGIPSLTKCCNQHGRCYKTHSKSENDCNEEFQSSLSKIRRDV |
Parental | QKTLGLAQHVQACENPVEL |
QKT.GLAQ..QACE...EL | |
Retrocopy | QKTPGLAQYIQACETTAEL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000015230 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000016169 | 2 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000016573 | 7 retrocopies | |
Homo sapiens | ENSG00000123739 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000001082 | 2 retrocopies | |
Loxodonta africana | ENSLAFG00000000852 | 2 retrocopies | |
Mustela putorius furo | ENSMPUG00000008637 | 1 retrocopy |
retro_mputfur_964 ,
|
Mus musculus | ENSMUSG00000027999 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000004686 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000014505 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000016362 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000009139 | 3 retrocopies | |
Tarsius syrichta | ENSTSYG00000004756 | 4 retrocopies | |
Vicugna pacos | ENSVPAG00000009842 | 1 retrocopy |