RetrogeneDB ID: | retro_nleu_2643 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397386.1:190973..191628(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ENSG00000073578 | ||
Ensembl ID: | ENSNLEG00000001292 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 96.8 % |
Parental protein coverage: | 63.93 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | GTRGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEEDHVYLQL |
GTRGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVS.SMTLEIR.GRGCGPEEDHVYLQL | |
Retrocopy | GTRGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSQSMTLEIRKGRGCGPEEDHVYLQL |
Parental | HHLPPEQLATRLRGISETAVIFIGVDVMKEPIPVLPTVHYNMDGIPTSYKGQVLRHVNGQDQIVPGLYTC |
HHLPPEQLATRLRGISETAVIF.GVDV.KEPIPVLPTVHYNMDGIPTSYKGQVLRHVNG.DQIVPGLYTC | |
Retrocopy | HHLPPEQLATRLRGISETAVIFTGVDVTKEPIPVLPTVHYNMDGIPTSYKGQVLRHVNG*DQIVPGLYTC |
Parental | GEAACASVHGANRLGANSLLDLVV-GQACALSIEKSCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRT |
GEAACASVHGANRLG.NSLLDLVV.GQACALSIEKSCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRT | |
Retrocopy | GEAACASVHGANRLGTNSLLDLVV>GQACALSIEKSCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRT |
Parental | SELRLSMQK |
SELRLSMQK | |
Retrocopy | SELRLSMQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Nomascus leucogenys | ENSNLEG00000001292 | 1 retrocopy |
retro_nleu_2643 ,
|
Ornithorhynchus anatinus | ENSOANG00000010157 | 1 retrocopy | |
Xenopus tropicalis | ENSXETG00000023408 | 1 retrocopy | |
Drosophila melanogaster | FBgn0261439 | 1 retrocopy |