RetrogeneDB ID: | retro_nleu_416 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397264.1:24471075..24471723(-) | ||
Located in intron of: | ENSNLEG00000017582 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GLUL | ||
Ensembl ID: | ENSNLEG00000018007 | ||
Aliases: | None | ||
Description: | Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:G1S8N9] |
Percent Identity: | 83.49 % |
Parental protein coverage: | 57.64 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | EGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVSNQHPWFGMEQEY-TL |
EGSNSDMYLVPAAMF.DPF.KD..KLV.CEVFK.NR.PAETNL.HTCKRIMD.VSNQH.WFGMEQEY.T. | |
Retrocopy | EGSNSDMYLVPAAMFWDPFHKDLHKLVFCEVFKCNRKPAETNLKHTCKRIMDIVSNQHSWFGMEQEYITS |
Parental | MG-TDGHPFGWPSNGFPGPQGP-YYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIG |
.G.TDGHPFGWPS.GFP.PQGP...C..GAD.AYGRDIVEAHY.ACLY.GVKIAGTNAEVM.A.WEFQIG | |
Retrocopy | WG<TDGHPFGWPSSGFPEPQGP>LNCSMGADKAYGRDIVEAHYQACLYSGVKIAGTNAEVMSARWEFQIG |
Parental | PCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKL |
PC.GIS..DHLWV..FILHRVCEDFGVIATFDPKPIPGNWNGAG.HTN.STKAMREENGLKYIEEAI.KL | |
Retrocopy | PCKGISVEDHLWVTCFILHRVCEDFGVIATFDPKPIPGNWNGAGRHTNISTKAMREENGLKYIEEAIKKL |
Parental | SKRHQYHI |
SK..QYHI | |
Retrocopy | SK*QQYHI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |