RetrogeneDB ID: | retro_ogar_1139 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873536.1:20947717..20948287(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000002521 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.16 % |
Parental protein coverage: | 69. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | NRKHKRKKRKYKPTGRKRGRPKGRKNTRSSRTDKKLFNKGPGFPFVESENEGKPLPWRKILTYEQAVARG |
NR.HK.....................TRSSRTDKKLFNKGPGFPFVESENEGKPLPWRKILTYEQAVARG | |
Retrocopy | NRNHKHXXXXXXXXXXXXXXXXXXXXTRSSRTDKKLFNKGPGFPFVESENEGKPLPWRKILTYEQAVARG |
Parental | FFNYIEKLKYEHYLKESLNQMDAGEDLEKEDFDSRRYKYLDDDGSISPIEESVAEDEDAAH---GECDIT |
FFNYIEKLKYEHYLKESLNQMDAGEDLEKEDFDSRRYKYL.DDGSISPIEES.AEDEDAAH...GECDIT | |
Retrocopy | FFNYIEKLKYEHYLKESLNQMDAGEDLEKEDFDSRRYKYLNDDGSISPIEESAAEDEDAAHVEHGECDIT |
Parental | LGADSSFIISSDFPRKINVYLEQNNGTKEAALSKKRATRARSIGQRTPRP |
LGADSSFI.S.DFPRKINVYLEQNN.TKEAALSKKRATRAR.IGQRTP.P | |
Retrocopy | LGADSSFIRSTDFPRKINVYLEQNNSTKEAALSKKRATRARCIGQRTPQP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000013436 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000011431 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000008546 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000001096 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000002521 | 1 retrocopy |
retro_ogar_1139 ,
|
Sarcophilus harrisii | ENSSHAG00000005874 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000014258 | 1 retrocopy |