>retro_tbel_1821
GAAAACAGTAGCGAGCTCGTTGAATTGGAGAAGTTAAAAGCAGCTTACATGAACAAAGGAAGGGCAGCTCAGATTGCTGA
AAAAGATGCCATTAAATATGAGCAGATGAAACGTGATGCTGAAATCGCCAAAACCATGATGGAAGGGCAGGAGCGAGCAA
TAAGGAAGAGAGTGCCGCCGAAGACAGACGGAACGAAGTGAAGGCACAAAACTATTTTGACTTAGAGAAACACGTTGAAG
AGCAAGAGAGGAAAGAGCAGGAAGCTTATGAACAGTTGTTGAAAGAAAAACTCATGACTGATGAAATCGCTAGGAAAATC
TATGAAGAAGATCAACTAGAAAAACAACACAAATTAGAAAAAATGAATGCCACTCGAAGGTATATAGAGGAGTTTCAGAA
AGAGCGGGCTCTCTGGAGAAAGAAGAAACGTGAGGAGATGGAAGAAGAGAACAGAAGAATCATGGAATTTGCCCACCAGC
AGCAAAGAGGAGAAAATTGGATGGCAAAAATTCAAGAAAATGAAGAAAAAAGACGCCAGCTTCAGGATGCGCTGGCTCAG
AAATTGGAAGAAATGCTGCGGCAACGTGACGATCTGGAACAAGTACGGCAGGAATTATATAAGGAGGAACAAGCTGAGTT
ACACGCCAGAAAACTAAAAGAAGAAGCAGAAGAGAAATTGAGAAAGCAAAAAAAGATGAAGTAAGATTTTGAAGAACAAA
TGGCCTTGAAGGAACTAGTACTACAGGCTGCAAAAGAGGAAGAGGAGATCTTTAGGAAAACTATGCTAGCTAAACTTGCT
GAGGATGATCGAATAGAATTGATGAATGCTCAGAAACAAAGAATGAAGCAACTGGAACACAGGAGGGCTGTGGAAAAACT
TATTGAAGATCGCCACAACCAGTTCCTTGAAGACAAA
ORF - retro_tbel_1821 Open Reading Frame is not conserved.
Retrocopy - Parental Gene Alignment summary:
Percent Identity: |
85.76 % |
Parental protein coverage: |
62.86 % |
Number of stop codons detected: |
0 |
Number of frameshifts detected |
1 |
Retrocopy - Parental Gene Alignment:
Parental | ENSIELRELEKKLKAAYMNKERAAQIAEKDAIKYEQMKRDAEIAKTMMEEQERVI-KEESAAEDKRNKVK |
| ENS.EL.ELEK.LKAAYMNK.RAAQIAEKDAIKYEQMKRDAEIAKTMME.QER.I.KEESAAED.RN.VK |
Retrocopy | ENSSELVELEK-LKAAYMNKGRAAQIAEKDAIKYEQMKRDAEIAKTMMEGQERAI<KEESAAEDRRNEVK |
|
Parental | AQYYFDLEKQVEEQERKKQEAYEQLLKEKLMIDEIVRKIYEEDQLEKQHKLEKMNATRRYIEEFQKEQAL |
| AQ.YFDLEK.VEEQERK.QEAYEQLLKEKLM.DEI.RKIYEEDQLEKQHKLEKMNATRRYIEEFQKE.AL |
Retrocopy | AQNYFDLEKHVEEQERKEQEAYEQLLKEKLMTDEIARKIYEEDQLEKQHKLEKMNATRRYIEEFQKERAL |
|
Parental | WRKKKREEMEEENRKIIEFAHIQQQREENRMAKIQENEEKRRQLQDALAQKLEEILRQRDDLEQVRQELY |
| WRKKKREEMEEENR.I.EFAH.QQQR.EN.MAKIQENEEKRRQLQDALAQKLEE.LRQRDDLEQVRQELY |
Retrocopy | WRKKKREEMEEENRRIMEFAH-QQQRGENWMAKIQENEEKRRQLQDALAQKLEEMLRQRDDLEQVRQELY |
|
Parental | QEEQAELHARKLKEEAEEKLRKQKEMKQDFEEQMALKELVLQATKEEEEIFRKTMLAKLAEDDRIELMNA |
| .EEQAELHA....................FEEQMALKELVLQA.KEEEEIFRKTMLAKLAEDDRIELMNA |
Retrocopy | KEEQAELHAXXXXXXXXXXXXXXXXXXXXFEEQMALKELVLQAAKEEEEIFRKTMLAKLAEDDRIELMNA |
|
Parental | QKQRMKQLEHRRAVEKLIEDRRNQFLEDK |
| QKQRMKQLEHRRAVEKLIEDR.NQFLEDK |
Retrocopy | QKQRMKQLEHRRAVEKLIEDRHNQFLEDK |
|
Legend:
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Tupaia belangeri was not studied using RNA-Seq expression data.
Tupaia belangeri was not studied using ChIP-Seq data.
No EST(s) were mapped for retro_tbel_1821 retrocopy.
Tupaia belangeri was not studied using FANTOM5 data.
retro_tbel_1821 was not experimentally validated.
Retrocopy orthology:
Tupaia belangeri does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to
help section.
Parental genes homology:
Parental genes homology involve
2 parental genes, and
4 retrocopies.