RetrogeneDB ID: | retro_tbel_2697 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_116894:211396..211682(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ZFAND2A | ||
Ensembl ID: | ENSTBEG00000007079 | ||
Aliases: | None | ||
Description: | zinc finger, AN1-type domain 2A [Source:HGNC Symbol;Acc:28073] |
Percent Identity: | 71.43 % |
Parental protein coverage: | 98.94 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MEFPDLGKHCSEKTCKQLDFLPLKCDACKQDFCKDHFTYAAHKCPFAFKKDVQVPVCP---LCNT-PI-P |
M.F.DLGKHCS.KTCK.L.FLPLKCDACKQDF.KDH.TYA.H.CPFAFKKDVQV.V.P....CNT.PI.P | |
Retrocopy | MKFSDLGKHCSGKTCKDLNFLPLKCDACKQDFHKDHLTYAVHECPFAFKKDVQVQVSPQGPVCNT<PI<P |
Parental | IKKGEIPDVVVGEHIDRDCNYHPGKNKE |
..KGEIP.VVV.E....D.NYHPGK.K. | |
Retrocopy | VRKGEIPGVVVRESTMTDYNYHPGKKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000015776 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000005496 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000002112 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000025494 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000000364 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000007079 | 2 retrocopies |
retro_tbel_2636, retro_tbel_2697 ,
|