RetrogeneDB ID: | retro_tsyr_1396 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_425870:878..1272(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TIMM17A | ||
Ensembl ID: | ENSTSYG00000011606 | ||
Aliases: | None | ||
Description: | translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:HGNC Symbol;Acc:17315] |
Percent Identity: | 78.68 % |
Parental protein coverage: | 77.19 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | NSPVGV-NHRLRGSLTAIKTRAPQLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGA-LTGAILAAR |
NS..GV.NHR.RGSLTAIKTRAPQLGGSF.VW.G.FS.IDC.M.Q.RGKEDPWNSITSGA.LTG.ILAAR | |
Retrocopy | NSSMGV>NHRPRGSLTAIKTRAPQLGGSFEVWRGSFSLIDCRMAQFRGKEDPWNSITSGA<LTGTILAAR |
Parental | NGPVAMVGSAAMGGILLALIEGAGILLTR-FASAQF-LNGPQFAEDPSQLPSTQLPSSPFGDYRQY |
NGPVAMV.SAA.G..LLA..EGAG.LLT..FA.A.F...GPQFAEDPSQLPST.LPSSPFGD.RQY | |
Retrocopy | NGPVAMVRSAALGSTLLAFLEGAGVLLTY<FAPA*F<SSGPQFAEDPSQLPSTLLPSSPFGDHRQY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |