RetrogeneDB ID: | retro_tsyr_146 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_3846:5897..6283(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NUDT15 | ||
Ensembl ID: | ENSTSYG00000006960 | ||
Aliases: | None | ||
Description: | nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:HGNC Symbol;Acc:23063] |
Percent Identity: | 73.85 % |
Parental protein coverage: | 78.18 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SVGAGSFQLPGGHLEFGETWEECALRETWEEAALHLKNVHFASVVNSFVEKENYHYVTILMKGEVDVTHD |
S.GAGSFQ.PGGH.EFGE.WEEC..RET...AALHLK...FASVV.SF.EK.NYHYVT.LMKGEVDVT.D | |
Retrocopy | SFGAGSFQFPGGHSEFGESWEECDHRETRKAAALHLKHANFASVVTSFIEKDNYHYVTRLMKGEVDVTRD |
Parental | SEP-KNVEPEKNESWEWVPWDEFPPLDQLFWALRCLKEQGYDPFKEDLNHLVGYKGNHLQ |
SE..KNVEPE.N.SWE..PW.EFP.LDQL...L.CLKEQGY.PF.E.LNHL.GYKGNHL. | |
Retrocopy | SES<KNVEPELNKSWECIPWEEFPVLDQLCQVLCCLKEQGYNPFEEVLNHLIGYKGNHLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000019501 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000009274 | 1 retrocopy | |
Homo sapiens | ENSG00000136159 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000008232 | 3 retrocopies | |
Microcebus murinus | ENSMICG00000009583 | 1 retrocopy | |
Mus musculus | ENSMUSG00000033405 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000002957 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000005353 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000042329 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000006960 | 1 retrocopy |
retro_tsyr_146 ,
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