RetrogeneDB ID: | retro_tsyr_37 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_476673:136..1027(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTSYG00000012937 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTSYG00000014106 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 98.65 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAGPMQGGGAKALDLLRTLPRVSLANLKPSPGSRKPERRPRGRRRGRKCGRGHKGERQRGTRPRLG-EGA |
MAGPMQGGGAKALDLLRTLPRVSLANLKPSPGSRKPERRPRGRRRGRKCGRGHKGERQRGTRPRLG.EG. | |
Retrocopy | MAGPMQGGGAKALDLLRTLPRVSLANLKPSPGSRKPERRPRGRRRGRKCGRGHKGERQRGTRPRLGFEGG |
Parental | QNP-YLRIPKYGFNEGHSFRRQYQPFSLNRLQYLIDLGRVDPSQPIDLTQLINGRGVTIQPLKRDYGVQL |
Q.P.YLRIPKYGFNEGHSFRRQYQPFSLNRLQYLIDLGRVDPSQPIDLTQLINGRGVTIQPLKRDYGVQL | |
Retrocopy | QTPFYLRIPKYGFNEGHSFRRQYQPFSLNRLQYLIDLGRVDPSQPIDLTQLINGRGVTIQPLKRDYGVQL |
Parental | VEEGADTFKAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLEILCKPVPFFLRGQPIPKRMLPPEEL |
VEEGADTFKAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLEILCKPVPFFLRGQPIPKRMLPPEEL | |
Retrocopy | VEEGADTFKAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLEILCKPVPFFLRGQPIPKRMLPPEEL |
Parental | VPYYTDAKNRGYLADPAEFPEARLELAKKYGYVLPDITKDELFKMLCTRKDPRQIFFGLAPGWVVNLIDK |
VPYYTDAKNRGYLADPAEFPEARLELAKKYGYVLPDITKDELFKMLCTRKDPRQIFFGLAPGWVVNLIDK | |
Retrocopy | VPYYTDAKNRGYLADPAEFPEARLELAKKYGYVLPDITKDELFKMLCTRKDPRQIFFGLAPGWVVNLIDK |
Parental | KILKPTDENLLKYYSS |
KILKPTDENLLKYYSS | |
Retrocopy | KILKPTDENLLKYYSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000001174 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000006988 | 2 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000005299 | 3 retrocopies | |
Callithrix jacchus | ENSCJAG00000016719 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000017664 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000001454 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000001724 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000010533 | 1 retrocopy | |
Mus musculus | ENSMUSG00000033845 | 2 retrocopies | |
Ornithorhynchus anatinus | ENSOANG00000007286 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000003768 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000000921 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000008566 | 2 retrocopies | |
Sus scrofa | ENSSSCG00000030578 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000014106 | 1 retrocopy |
retro_tsyr_37 ,
|
Tursiops truncatus | ENSTTRG00000011844 | 2 retrocopies |