RetrogeneDB ID: | retro_ttru_1877 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_96806:35208..35718(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DUSP11 | ||
Ensembl ID: | ENSTTRG00000015444 | ||
Aliases: | None | ||
Description: | dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:HGNC Symbol;Acc:3066] |
Percent Identity: | 76.47 % |
Parental protein coverage: | 94.41 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSQWHHARGHWGQRRGFSGRSSARRKGGKHMPERWEDYLPVEQPMSGTRFLAFKVPLKKSFEKNLASEEL |
MSQWHHAR...GQ..GFSG.SSA.RKGGKH..ERW.DYLPV.Q.M.GTRF.AFKVPLKKSFEKNLA.EE. | |
Retrocopy | MSQWHHARERCGQGHGFSGCSSAKRKGGKHILERWKDYLPVGQWMPGTRFIAFKVPLKKSFEKNLAPEEC |
Parental | FSLLDLFNKL-EQNEELGLIIDLTYNRRFYKPEDLQEIIPYLKICTIGHLVPDDHTIFKFQCAVKGFLKE |
F......NK..EQNEELGLIIDLTY....YKPEDL.E.IPYL.ICTIGH..P.D.TIFKFQCAV.GFLKE | |
Retrocopy | FPPCIFLNKIQEQNEELGLIIDLTYTCPNYKPEDLPETIPYLRICTIGHQMPGDDTIFKFQCAVNGFLKE |
Parental | NKDNDRLIGVHCTHGLNRTGYLICRYLVDV |
NKDNDRLIGVHCTHGLNRTGYLICR...D. | |
Retrocopy | NKDNDRLIGVHCTHGLNRTGYLICRTSLDL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000012041 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000005304 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000009370 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000014600 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000015444 | 5 retrocopies |