Parental gene: | AMTR_s00045p00165520 |
| Aliases: | None |
| Description: | nuclear encoded CLP protease 5 [Source:Projected from Arabidopsis thaliana (AT1G02560) TAIR;Acc:AT1G02560] |
| Organism: | Amborella (Amborella trichopoda) |
| Coordinates: | AmTr_v1.0_scaffold00045:2607519..2614267(+) |
>AMTR_s00045p00165520
ATGGCGCATTCCTGTGTTGCGACAGCAGGAAGTGGCATTAAGCTGCATCTCAATCACTCGAAGCAGTCGCAAAACCCTGT
TAACCTTCCCTTTGTGAAGCTCCCTACTGGAAAACAAAATTCCATCTGCAGTAAAAAGAAAATATTGAGTTCTCCGAGAG
CCACTTATTCTGGGGGATATTGGACCCCCGAATGTGATTCTCGTAAAGGCATATGGTCTGTAAGGGATGATTTGCATATT
CCTTCATCCCCATACTTCCCCATAGCCCAGGCTGGTCAAGGGCCACCACCCATGGTGCAAGAACGATTCCAGAGCGTTAT
CAGTCAGCTTTTTCAGCATAGGATAATTCGTTGTGGGGGAGCTGTGGATGATGATATGGCAAATGTTATTGTTGCACAAC
TTCTCTATCTCGATGCCGTCGATCCTTACAAGGACATCGTTATATATGTCAACTCTCCCGGAGGGTCTGTGACGGCAGGT
ATGGCCATATTTGATACCATGAAACATATCAGACCTGATGTATCCACTGTTTGTGTTGGCCTGGCTGCTAGCATGGGGGC
CTTTATTCTTAGCTCCGGCACAAAAGGGAAACGATACAGCTTGCCCAACTCTAGGATCATGATTCATCAGCCTCTTGGTG
GAGCTCAGGGTGGGCAAACTGACATAGACATCCAGGCCAATGAGATGCTACATCACAAGGCGAATCTTAACGGGTACCTG
TCATACCATACTGGGCAAAGCCTTGACAAGATAAACCAGGACACTGACCGAGACTTCTTCATGAGCGCCAAGGAAGCAAA
AGATTATGGTCTTATTGATGGCATTATCTTGAATCCTCTCAAAGCTCTCCAGCCCCTACCAGCTGCGCCTGCAGAAGAAT
CACCATGA
ATGGCGCATTCCTGTGTTGCGACAGCAGGAAGTGGCATTAAGCTGCATCTCAATCACTCGAAGCAGTCGCAAAACCCTGT
TAACCTTCCCTTTGTGAAGCTCCCTACTGGAAAACAAAATTCCATCTGCAGTAAAAAGAAAATATTGAGTTCTCCGAGAG
CCACTTATTCTGGGGGATATTGGACCCCCGAATGTGATTCTCGTAAAGGCATATGGTCTGTAAGGGATGATTTGCATATT
CCTTCATCCCCATACTTCCCCATAGCCCAGGCTGGTCAAGGGCCACCACCCATGGTGCAAGAACGATTCCAGAGCGTTAT
CAGTCAGCTTTTTCAGCATAGGATAATTCGTTGTGGGGGAGCTGTGGATGATGATATGGCAAATGTTATTGTTGCACAAC
TTCTCTATCTCGATGCCGTCGATCCTTACAAGGACATCGTTATATATGTCAACTCTCCCGGAGGGTCTGTGACGGCAGGT
ATGGCCATATTTGATACCATGAAACATATCAGACCTGATGTATCCACTGTTTGTGTTGGCCTGGCTGCTAGCATGGGGGC
CTTTATTCTTAGCTCCGGCACAAAAGGGAAACGATACAGCTTGCCCAACTCTAGGATCATGATTCATCAGCCTCTTGGTG
GAGCTCAGGGTGGGCAAACTGACATAGACATCCAGGCCAATGAGATGCTACATCACAAGGCGAATCTTAACGGGTACCTG
TCATACCATACTGGGCAAAGCCTTGACAAGATAAACCAGGACACTGACCGAGACTTCTTCATGAGCGCCAAGGAAGCAAA
AGATTATGGTCTTATTGATGGCATTATCTTGAATCCTCTCAAAGCTCTCCAGCCCCTACCAGCTGCGCCTGCAGAAGAAT
CACCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza brachyantha | OB03G24650 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA03G0142400 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_4AS_C67AE6944 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_atri_13 | 50.57 | 59.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all AMTR_s00045p00165520 retrocopies