Parental gene: | AMTR_s00080p00093010 |
| Aliases: | None |
| Description: | arogenate dehydratase 2 [Source:Projected from Arabidopsis thaliana (AT3G07630) TAIR;Acc:AT3G07630] |
| Organism: | Amborella (Amborella trichopoda) |
| Coordinates: | AmTr_v1.0_scaffold00080:1098659..1124498(+) |
>AMTR_s00080p00093010
ATGGCGTCTTCATCCGTAACCCTCAGCCGATTTATACCTTGCGCTGATTCCAGCCCAAAGCTCTCAACTTTGAGCACCAG
ACCAGAAAACGCAATCAGTCTCCCTTCTCGTATCAGGCCCAAGGTGAGGAAAACCTCTGTAATGGTAATGACCTCCATTC
ATGGTGATAATCCTTTGGAAGACTCTTCCAAAACCAGAGCTCTAGACTTGCAGAGATTGTTCGCTGATGAACCTGCTCCA
AAAGAATCTGTTTCGTTGCCGAGGCCTCTTTCGGTGACTGATTTGTCAGGGTCAGTCAATCGAGGGTCTCGACTACGAGT
AGCTTACCAGGGTGTTCCTGGTGCCTACAGCGAAGCTGCGGCTGCAAAAGCCTACCCCAATTGTGAAGCCGTTCCTTGTG
AACAGTTTGAAACTGCTTTTGGTGCTGTTGAACGATGGCTTGTTGACAGAGCAGTTTTACCAATTGAGAACTCGCTAGGA
GGCAGCATTCACCGCAATTATGACCTTTTGCTTCGCCATAGACTGCACATTGTTGGGGAAGTACAATTTGCAGTTCGACA
CTGCTTACTGGCTGTCCCAGGTGTAAAAATTGAGAATCTTAAAAGAGTTCTTAGCCATCCTCAAGCTCTTTCACAGTGTG
AGAATAAGCTAACGAAGTTGGGAGTTGTGAGGGAAGCTGTAGATGACACTGCAGGTGCTGCACATTTAGTTGCCACCCAT
GAACTCCAAGATGCCGGTGCTGTTGCTAGTGCTCGAGCTGCAGAAATTTATGGGTTGGACATTCTTGCACAAGACATCCA
GGATGACTCTGACAATGTCACTCGATTCCTGATGCTTGCAAGAGAACCTATAATACCAGGTGTGGACAGGCCATTCAAGA
CGAGCATAGTTTTTTCCCTGGAGGAAGGATCCGGGGTACTTTTCAAGGCACTCGCCGTCTTTGCTATGAGGCAGATTAAC
CTTACAAAGATTGAAAGCCGACCGCGAAGAAAACACTCACTGCACATTCCCATTCCTGAAGAATGCAGTAATGGATCTCC
AAAGTACTTTGATTACCTCTTTTATGTCGATTTTGATGCTTCAATGGCTGACGAGAGGGCACAAAATGCGCTAAGGCATC
TCAGGGAGTTTGCGACATTCCTTAGAGTTCTTGGAAGCTACCCCAAGGATATAAGTCAGGTGTAG
ATGGCGTCTTCATCCGTAACCCTCAGCCGATTTATACCTTGCGCTGATTCCAGCCCAAAGCTCTCAACTTTGAGCACCAG
ACCAGAAAACGCAATCAGTCTCCCTTCTCGTATCAGGCCCAAGGTGAGGAAAACCTCTGTAATGGTAATGACCTCCATTC
ATGGTGATAATCCTTTGGAAGACTCTTCCAAAACCAGAGCTCTAGACTTGCAGAGATTGTTCGCTGATGAACCTGCTCCA
AAAGAATCTGTTTCGTTGCCGAGGCCTCTTTCGGTGACTGATTTGTCAGGGTCAGTCAATCGAGGGTCTCGACTACGAGT
AGCTTACCAGGGTGTTCCTGGTGCCTACAGCGAAGCTGCGGCTGCAAAAGCCTACCCCAATTGTGAAGCCGTTCCTTGTG
AACAGTTTGAAACTGCTTTTGGTGCTGTTGAACGATGGCTTGTTGACAGAGCAGTTTTACCAATTGAGAACTCGCTAGGA
GGCAGCATTCACCGCAATTATGACCTTTTGCTTCGCCATAGACTGCACATTGTTGGGGAAGTACAATTTGCAGTTCGACA
CTGCTTACTGGCTGTCCCAGGTGTAAAAATTGAGAATCTTAAAAGAGTTCTTAGCCATCCTCAAGCTCTTTCACAGTGTG
AGAATAAGCTAACGAAGTTGGGAGTTGTGAGGGAAGCTGTAGATGACACTGCAGGTGCTGCACATTTAGTTGCCACCCAT
GAACTCCAAGATGCCGGTGCTGTTGCTAGTGCTCGAGCTGCAGAAATTTATGGGTTGGACATTCTTGCACAAGACATCCA
GGATGACTCTGACAATGTCACTCGATTCCTGATGCTTGCAAGAGAACCTATAATACCAGGTGTGGACAGGCCATTCAAGA
CGAGCATAGTTTTTTCCCTGGAGGAAGGATCCGGGGTACTTTTCAAGGCACTCGCCGTCTTTGCTATGAGGCAGATTAAC
CTTACAAAGATTGAAAGCCGACCGCGAAGAAAACACTCACTGCACATTCCCATTCCTGAAGAATGCAGTAATGGATCTCC
AAAGTACTTTGATTACCTCTTTTATGTCGATTTTGATGCTTCAATGGCTGACGAGAGGGCACAAAATGCGCTAAGGCATC
TCAGGGAGTTTGCGACATTCCTTAGAGTTCTTGGAAGCTACCCCAAGGATATAAGTCAGGTGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza brachyantha | OB07G32920 | ortholog_one2many | 1 retrogene | |
| Oryza nivara | ONIVA03G14420 | ortholog_one2many | 1 retrogene | |
| Oryza glaberrima | ORGLA03G0127300 | ortholog_one2many | 1 retrogene | |
| Oryza rufipogon | ORUFI03G13820 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_atri_11 | 68.77 | 79.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all AMTR_s00080p00093010 retrocopies