Parental gene: | emb1220, AT1G60170 |
| Aliases: | None |
| Description: | pre-mRNA processing ribonucleoprotein binding region-containing protein [Source:TAIR;Acc:AT1G60170] |
| Organism: | Mouse-ear cress (Arabidopsis thaliana) |
| Coordinates: | 1:22192772..22195400(+) |
>AT1G60170
ATGGCAACTCTTGAAGATTCTTTCCTTGCTGATTTGGACGAGTTATCTGACAATGAAGCAGAATTGGACGAGAATGATGG
TGATGTTGGAAAGGAAGAAGAAGATGTTGATATGGATATGGCTGATTTAGAGACACTTAACTATGATGATCTCGATAATG
TTTCTAAGCTGCAGAAGAGTCAGAGATATGCTGATATTATGCATAAAGTAGAGGAGGCTCTTGGGAAAGATTCTGATGGA
GCTGAGAAAGGAACTGTCTTGGAAGATGATCCTGAGTATAAGCTTATTGTGGATTGTAATCAGCTTTCGGTCGATATTGA
GAATGAAATCGTTATTGTCCACAACTTTATCAAAGACAAGTACAAGCTTAAGTTTCAAGAGCTTGAGTCGTTGGTTCATC
ACCCTATTGACTATGCATGTGTTGTGAAGAAGATTGGGAATGAGACGGATTTGGCTCTTGTTGATCTCGCTGACCTTCTT
CCTTCAGCTATTATCATGGTTGTTTCAGTTACTGCTTTAACTACGAAAGGGAGTGCACTGCCAGAGGATGTTTTGCAAAA
GGTGTTAGAGGCTTGTGATCGGGCTTTAGATCTTGATTCCGCAAGGAAGAAGGTCCTTGAGTTTGTTGAAAGTAAGATGG
GATCTATTGCACCTAATCTTTCTGCTATTGTTGGGAGTGCTGTTGCAGCCAAACTCATGGGGACTGCTGGAGGTTTGTCA
GCACTTGCTAAAATGCCTGCGTGTAATGTTCAAGTTCTTGGCCACAAGAGGAAGAACCTTGCTGGGTTTTCTTCTGCAAC
GTCTCAGTCCCGTGTGGGTTATCTGGAGCAGACAGAGATTTACCAAAGCACGCCTCCTGGACTTCAGGCTCGCGCTGGCA
GGCTCGTGGCTGCAAAATCAACTTTGGCAGCAAGAGTTGATGCTACTAGAGGGGATCCGTTAGGGATAAGTGGAAAAGCT
TTCAGGGAGGAGATCCGTAAGAAGATTGAGAAATGGCAAGAACCTCCTCCTGCAAGACAGCCTAAGCCACTTCCTGTTCC
TGATTCTGAACCGAAGAAAAGAAGGGGTGGTCGCCGTCTAAGAAAAATGAAAGAAAGGTATCAAGTAACAGATATGAGGA
AGCTGGCCAACAGAATGGCGTTTGGTACACCTGAAGAGAGCTCCCTCGGTGATGGACTAGGAGAAGGTTATGGAATGCTT
GGCCAGGCAGGAAGCAACAGGCTGCGAGTATCCAGTGTTCCGAGCAAGCTTAAGATTAATGCTAAGGTCGCCAAAAAGCT
TAAAGAAAGGCAGTATGCGGGTGGTGCGACTACCTCTGGTTTGACATCGAGCCTGGCTTTCACTCCTGTGCAGGGAATAG
AGTTGTGCAATCCTCAGCAGGCTTTAGGATTAGGAAGTGGGACTCAAAGCACTTACTTCTCAGAGTCAGGAACCTTCTCG
AAGCTGAAGAAGATCTAA
ATGGCAACTCTTGAAGATTCTTTCCTTGCTGATTTGGACGAGTTATCTGACAATGAAGCAGAATTGGACGAGAATGATGG
TGATGTTGGAAAGGAAGAAGAAGATGTTGATATGGATATGGCTGATTTAGAGACACTTAACTATGATGATCTCGATAATG
TTTCTAAGCTGCAGAAGAGTCAGAGATATGCTGATATTATGCATAAAGTAGAGGAGGCTCTTGGGAAAGATTCTGATGGA
GCTGAGAAAGGAACTGTCTTGGAAGATGATCCTGAGTATAAGCTTATTGTGGATTGTAATCAGCTTTCGGTCGATATTGA
GAATGAAATCGTTATTGTCCACAACTTTATCAAAGACAAGTACAAGCTTAAGTTTCAAGAGCTTGAGTCGTTGGTTCATC
ACCCTATTGACTATGCATGTGTTGTGAAGAAGATTGGGAATGAGACGGATTTGGCTCTTGTTGATCTCGCTGACCTTCTT
CCTTCAGCTATTATCATGGTTGTTTCAGTTACTGCTTTAACTACGAAAGGGAGTGCACTGCCAGAGGATGTTTTGCAAAA
GGTGTTAGAGGCTTGTGATCGGGCTTTAGATCTTGATTCCGCAAGGAAGAAGGTCCTTGAGTTTGTTGAAAGTAAGATGG
GATCTATTGCACCTAATCTTTCTGCTATTGTTGGGAGTGCTGTTGCAGCCAAACTCATGGGGACTGCTGGAGGTTTGTCA
GCACTTGCTAAAATGCCTGCGTGTAATGTTCAAGTTCTTGGCCACAAGAGGAAGAACCTTGCTGGGTTTTCTTCTGCAAC
GTCTCAGTCCCGTGTGGGTTATCTGGAGCAGACAGAGATTTACCAAAGCACGCCTCCTGGACTTCAGGCTCGCGCTGGCA
GGCTCGTGGCTGCAAAATCAACTTTGGCAGCAAGAGTTGATGCTACTAGAGGGGATCCGTTAGGGATAAGTGGAAAAGCT
TTCAGGGAGGAGATCCGTAAGAAGATTGAGAAATGGCAAGAACCTCCTCCTGCAAGACAGCCTAAGCCACTTCCTGTTCC
TGATTCTGAACCGAAGAAAAGAAGGGGTGGTCGCCGTCTAAGAAAAATGAAAGAAAGGTATCAAGTAACAGATATGAGGA
AGCTGGCCAACAGAATGGCGTTTGGTACACCTGAAGAGAGCTCCCTCGGTGATGGACTAGGAGAAGGTTATGGAATGCTT
GGCCAGGCAGGAAGCAACAGGCTGCGAGTATCCAGTGTTCCGAGCAAGCTTAAGATTAATGCTAAGGTCGCCAAAAAGCT
TAAAGAAAGGCAGTATGCGGGTGGTGCGACTACCTCTGGTTTGACATCGAGCCTGGCTTTCACTCCTGTGCAGGGAATAG
AGTTGTGCAATCCTCAGCAGGCTTTAGGATTAGGAAGTGGGACTCAAAGCACTTACTTCTCAGAGTCAGGAACCTTCTCG
AAGCTGAAGAAGATCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brassica oleracea | Bo1g091740 | ortholog_one2many | 1 retrogene | |
| Brassica rapa | Bra031522 | ortholog_one2one | 1 retrogene | |
| Solanum tuberosum | PGSC0003DMG400004771 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_atha_27 | 91.24 | 79.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all AT1G60170 retrocopies