Parental gene: | BGIOSGA009904 |
| Aliases: | None |
| Description: | None |
| Organism: | Rice subsp. indica (Oryza sativa indica) |
| Coordinates: | 3:33435463..33438802(-) |
>BGIOSGA009904
ATGGCCGAGGTGACGGTGGTCCGTGCGGAGCGCGAGGAGGAGTCCACCCTGGAGCAGGGTCTCCTCGCCATCCCGGAGGA
ATCCAACCAACTTACATACACTGGAGATGGATCTGTCGACTTTTCTGGGAATCCTGTTGTGAAGGAGAGAACTGGTAGAT
GGAGGGCATGCCCATTTATCTTAGGTAATGAGTGCTGTGAGCGGTTGGCCTATTATGGAATCTCCACAAACCTTGTTACA
TACTTGACAAAGAAACTGCATGATGGTAATGCTTCTGCTGCTAGCAATGTGACTGCATGGCAGGGAACTTGCTACTTAAC
TCCCCTTATTGGAGCTATACTGGCTGATGCATACTGGGGAAGGTATTGGACTATTGCAACATTCTCCACGATATACTTCA
TTGGGATGGCTGTACTGACTCTTTCAGCATCAGTTCCTACATTCATGCCTCCACCTTGCGAAGGGTCCTTTTGCCCACCA
GCAAATCCATTGCAGTATACTGTCTTTTTTCTTGGACTTTACCTAATTGCTCTTGGTACTGGTGGTATTAAGCCCTGTGT
CTCATCCTTTGGAGCAGATCAATTTGATGATACAGACCCAGTTGAGCGAATCCAGAAGGGATCTTTCTTTAACTGGTTCT
ATTTCTCAATAAACATTGGTGCTCTCATATCAAGCAGTTTTCTGGTTTGGGTGCAAGACAATATAGGATGGGGAATAGGC
TTTGGCATTCCAACAATTTTCATGGGGCTGGCCATCATAAGTTTCTTCTCTGGAACATCACTTTATAGATTCCAAAAGCC
AGGCGGCAGTCCTATTACACGAGTATGCCAGGTGGTTGTTGCCTCCTTTCGCAAGTGGAACGTACATGTTCCAGAGGATA
GCTCTCGCTTGTATGAGTTGCCTGATGGGGCTTCAGCAATTGAAGGGAGTCGGCAATTGGAGCACACCGATGAACTCAGA
TGTCTGGACAAAGCTGCTACAATTACTGATCTTGATGTGAAAGCAGATAGCTTTACAAACCCATGGCGAATATGCACTGT
GACTCAGGTGGAAGAACTGAAGATATTGGTAAGGATGTTCCCTGTCTGGGCAACGACTATTGTGTTTTCTGCTGTCTATG
CTCAGATGTCCACCATGTTTGTTGAGCAAGGGATGATGCTTGATACATCAGTAGGTCCATTCAAGATTCCTCCAGCATCT
CTATCTACCTTTGATGTGGTAAGTGTCATTATATGGGTCCCCCTCTATGATAGTATCTTGGTTCCAATAGCTAGGAGGTT
CACTGGCAACCCGAGGGGCTTTACAGAGTTACAGAGGATGGGGATTGGTTTGGTAATCTCAATCTTTTCGATGGCGGCAG
CTGCAGTTCTTGAGATTAAAAGGTTGGACATTGCAAGGGCTGAACATTTGGTGGATCAAAATGTTCCAGTACCACTGAAC
ATCTGCTGGCAAATTCCTCAATATTTCTTGGTTGGTGCCTCAGAGGTCTTCACATTTGTCGGGTCACTTGAGTTCTTCTA
TGATCAATCACCGGATGCCATGAGGAGCCTCTGCAGCGCACTGCAGCTTGTCACAACAGCTCTTGGGAATTATCTCAGTG
CATTCATTTTGACATTGGTTGCGTACTTCACAACAAGAGGAGGAAATCCTGGATGGATTCCTGATAACTTGAATCAAGGT
CACCTAGATTATTTCTTCTGGCTTCTTGCTGGGCTCAGTTTTCTGAACTTTGTGATATATGTCATCTGCGCAAACAAATA
CAAAAGCAAGAAAGCAGCTTGA
ATGGCCGAGGTGACGGTGGTCCGTGCGGAGCGCGAGGAGGAGTCCACCCTGGAGCAGGGTCTCCTCGCCATCCCGGAGGA
ATCCAACCAACTTACATACACTGGAGATGGATCTGTCGACTTTTCTGGGAATCCTGTTGTGAAGGAGAGAACTGGTAGAT
GGAGGGCATGCCCATTTATCTTAGGTAATGAGTGCTGTGAGCGGTTGGCCTATTATGGAATCTCCACAAACCTTGTTACA
TACTTGACAAAGAAACTGCATGATGGTAATGCTTCTGCTGCTAGCAATGTGACTGCATGGCAGGGAACTTGCTACTTAAC
TCCCCTTATTGGAGCTATACTGGCTGATGCATACTGGGGAAGGTATTGGACTATTGCAACATTCTCCACGATATACTTCA
TTGGGATGGCTGTACTGACTCTTTCAGCATCAGTTCCTACATTCATGCCTCCACCTTGCGAAGGGTCCTTTTGCCCACCA
GCAAATCCATTGCAGTATACTGTCTTTTTTCTTGGACTTTACCTAATTGCTCTTGGTACTGGTGGTATTAAGCCCTGTGT
CTCATCCTTTGGAGCAGATCAATTTGATGATACAGACCCAGTTGAGCGAATCCAGAAGGGATCTTTCTTTAACTGGTTCT
ATTTCTCAATAAACATTGGTGCTCTCATATCAAGCAGTTTTCTGGTTTGGGTGCAAGACAATATAGGATGGGGAATAGGC
TTTGGCATTCCAACAATTTTCATGGGGCTGGCCATCATAAGTTTCTTCTCTGGAACATCACTTTATAGATTCCAAAAGCC
AGGCGGCAGTCCTATTACACGAGTATGCCAGGTGGTTGTTGCCTCCTTTCGCAAGTGGAACGTACATGTTCCAGAGGATA
GCTCTCGCTTGTATGAGTTGCCTGATGGGGCTTCAGCAATTGAAGGGAGTCGGCAATTGGAGCACACCGATGAACTCAGA
TGTCTGGACAAAGCTGCTACAATTACTGATCTTGATGTGAAAGCAGATAGCTTTACAAACCCATGGCGAATATGCACTGT
GACTCAGGTGGAAGAACTGAAGATATTGGTAAGGATGTTCCCTGTCTGGGCAACGACTATTGTGTTTTCTGCTGTCTATG
CTCAGATGTCCACCATGTTTGTTGAGCAAGGGATGATGCTTGATACATCAGTAGGTCCATTCAAGATTCCTCCAGCATCT
CTATCTACCTTTGATGTGGTAAGTGTCATTATATGGGTCCCCCTCTATGATAGTATCTTGGTTCCAATAGCTAGGAGGTT
CACTGGCAACCCGAGGGGCTTTACAGAGTTACAGAGGATGGGGATTGGTTTGGTAATCTCAATCTTTTCGATGGCGGCAG
CTGCAGTTCTTGAGATTAAAAGGTTGGACATTGCAAGGGCTGAACATTTGGTGGATCAAAATGTTCCAGTACCACTGAAC
ATCTGCTGGCAAATTCCTCAATATTTCTTGGTTGGTGCCTCAGAGGTCTTCACATTTGTCGGGTCACTTGAGTTCTTCTA
TGATCAATCACCGGATGCCATGAGGAGCCTCTGCAGCGCACTGCAGCTTGTCACAACAGCTCTTGGGAATTATCTCAGTG
CATTCATTTTGACATTGGTTGCGTACTTCACAACAAGAGGAGGAAATCCTGGATGGATTCCTGATAACTTGAATCAAGGT
CACCTAGATTATTTCTTCTGGCTTCTTGCTGGGCTCAGTTTTCTGAACTTTGTGATATATGTCATCTGCGCAAACAAATA
CAAAAGCAAGAAAGCAGCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Hordeum vulgare | MLOC_58062 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM02G34910 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA03G0409900 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI03G33580 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS03G0719900 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_4AL_59D5504B1 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oind_36 | 59.19 | 78.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all BGIOSGA009904 retrocopies